Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHB3Q9Y5E6 AC026271.5-201ENST00000577873 130 ntBASIC3.22□□□□□ -1.89
PCDHB3Q9Y5E6 MIR7112-201ENST00000616126 65 ntBASIC3.22□□□□□ -1.89
PCDHB3Q9Y5E6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHB3Q9Y5E6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHB3Q9Y5E6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHB3Q9Y5E6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHB3Q9Y5E6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHB3Q9Y5E6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
PCDHB3Q9Y5E6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PCDHB3Q9Y5E6 MIR1265-201ENST00000408444 86 ntBASIC3.21□□□□□ -1.9
PCDHB3Q9Y5E6 MIR4796-201ENST00000580742 81 ntBASIC3.21□□□□□ -1.9
PCDHB3Q9Y5E6 AL512598.1-201ENST00000610158 273 ntBASIC3.21□□□□□ -1.9
PCDHB3Q9Y5E6 AL162274.2-201ENST00000614406 332 ntBASIC3.21□□□□□ -1.9
PCDHB3Q9Y5E6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB3Q9Y5E6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PCDHB3Q9Y5E6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHB3Q9Y5E6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 RNU1-109P-201ENST00000383960 147 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 RNU6-1237P-201ENST00000384777 107 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 BX510359.4-201ENST00000423750 193 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 AC115115.1-201ENST00000449927 248 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 RPS29P11-201ENST00000496507 171 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 MIR4325-201ENST00000583049 90 ntBASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PCDHB3Q9Y5E6 RNU6-161P-201ENST00000363051 106 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 MIR29C-201ENST00000385231 88 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 RNU4-83P-201ENST00000410863 133 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 RNU4-47P-201ENST00000410876 114 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 RNU1-143P-201ENST00000516296 146 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 SNORA74.3-201ENST00000517108 154 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 CYP3A52P-201ENST00000563326 91 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 AC133485.1-201ENST00000567176 124 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 U1.23-201ENST00000610293 146 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 AC021506.2-201ENST00000612354 169 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 RNU1-68P-201ENST00000615382 146 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 U1.39-201ENST00000621562 146 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 AL513423.1-201ENST00000621695 132 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 MAPK10-266ENST00000641066 6555 ntBASIC3.19□□□□□ -1.9
PCDHB3Q9Y5E6 AC008163.1-202ENST00000636004 2889 ntBASIC3.18□□□□□ -1.9
PCDHB3Q9Y5E6 MIR660-201ENST00000385235 97 ntBASIC3.18□□□□□ -1.9
PCDHB3Q9Y5E6 AC104332.2-201ENST00000429959 156 ntBASIC3.18□□□□□ -1.9
PCDHB3Q9Y5E6 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
PCDHB3Q9Y5E6 AP000753.3-201ENST00000604083 169 ntBASIC3.18□□□□□ -1.9
PCDHB3Q9Y5E6 AC022202.1-201ENST00000613515 211 ntBASIC3.18□□□□□ -1.9
PCDHB3Q9Y5E6 AC009487.2-201ENST00000420969 6821 ntBASIC3.18□□□□□ -1.9
PCDHB3Q9Y5E6 Y_RNA.532-201ENST00000384590 113 ntBASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 Y_RNA.660-201ENST00000516002 120 ntBASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 RNU6-1108P-201ENST00000516308 104 ntBASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 RNU6-448P-201ENST00000517052 107 ntBASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 SNORA31.26-201ENST00000517250 137 ntBASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 MIR5004-201ENST00000579078 107 ntBASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 AC008133.2-201ENST00000624540 351 ntBASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB3Q9Y5E6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 FGF7P7-201ENST00000514120 227 ntBASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 RNU6-56P-201ENST00000516986 93 ntBASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 AC090897.1-201ENST00000580909 226 ntBASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 AL449363.1-201ENST00000617815 186 ntBASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB3Q9Y5E6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
PCDHB3Q9Y5E6 RNA5SP374-201ENST00000362939 125 ntBASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 RNY1P2-201ENST00000364820 117 ntBASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 MIR597-201ENST00000384968 97 ntBASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 COTL1P1-201ENST00000422309 375 ntBASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 SNRPGP12-201ENST00000449481 213 ntBASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 Y_RNA.648-201ENST00000459455 110 ntBASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 AC141846.1-201ENST00000568348 142 ntBASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHB3Q9Y5E6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB3Q9Y5E6 SNORA38-201ENST00000363946 132 ntBASIC3.14□□□□□ -1.91
PCDHB3Q9Y5E6 SNORA25.9-201ENST00000365087 128 ntBASIC3.14□□□□□ -1.91
PCDHB3Q9Y5E6 RNU7-43P-201ENST00000516554 64 ntBASIC3.14□□□□□ -1.91
PCDHB3Q9Y5E6 RNA5SP437-201ENST00000517249 129 ntBASIC3.14□□□□□ -1.91
PCDHB3Q9Y5E6 MIR4513-201ENST00000581077 86 ntBASIC3.14□□□□□ -1.91
PCDHB3Q9Y5E6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB3Q9Y5E6 MIR422A-201ENST00000362286 90 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 Y_RNA.386-201ENST00000383913 105 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 UBBP3-201ENST00000445497 241 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 RNU6-634P-201ENST00000459134 106 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 AC099513.1-201ENST00000490423 301 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 RNA5SP341-201ENST00000516261 117 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 RNU6-70P-201ENST00000516438 60 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 RNU6-687P-201ENST00000516443 89 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 MIR4484-201ENST00000582855 83 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
PCDHB3Q9Y5E6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms