Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 RPL39P39-201ENST00000455840 151 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 RPS29P29-201ENST00000456396 171 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 RPL30P7-201ENST00000479312 323 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNA5SP445-201ENST00000515889 115 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU6-958P-201ENST00000516995 106 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 AP001485.1-201ENST00000604799 199 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 AL596211.1-201ENST00000569873 2277 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU1-133P-201ENST00000364867 167 ntBASIC1.67□□□□□ -2.14
NIPSNAP3AQ9UFN0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.67□□□□□ -2.14
NIPSNAP3AQ9UFN0 AL035398.1-201ENST00000430869 322 ntBASIC1.67□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU6-998P-201ENST00000515894 101 ntBASIC1.67□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU5E-3P-201ENST00000515913 68 ntBASIC1.67□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU7-41P-201ENST00000515917 61 ntBASIC1.67□□□□□ -2.14
NIPSNAP3AQ9UFN0 Y_RNA.690-201ENST00000516603 95 ntBASIC1.67□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU2-60P-201ENST00000517290 128 ntBASIC1.67□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU6-704P-201ENST00000364162 103 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 SNORD50.2-201ENST00000365465 70 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 SNORA40-201ENST00000388090 126 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC245517.4-201ENST00000448601 281 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU2-11P-201ENST00000459191 187 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU2-13P-201ENST00000515909 113 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU7-53P-201ENST00000516705 60 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 MIR3664-201ENST00000579074 99 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 MIR4524B-201ENST00000581569 115 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 AL096861.1-201ENST00000610899 123 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC091932.4-201ENST00000623386 200 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 AP001340.1-201ENST00000624405 217 ntBASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NIPSNAP3AQ9UFN0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
NIPSNAP3AQ9UFN0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL603914.1-201ENST00000401964 204 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 MIR1289-2-201ENST00000408360 111 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-257P-201ENST00000410238 98 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 RPS27P16-201ENST00000425758 201 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 snoU13.23-201ENST00000458863 104 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNA5SP236-201ENST00000516169 116 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL512310.8-201ENST00000550183 120 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 AC011603.4-201ENST00000611325 277 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 MIR4251-201ENST00000635819 61 ntBASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
NIPSNAP3AQ9UFN0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 MIR583-201ENST00000384846 75 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU4-61P-201ENST00000411243 107 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 MTND4LP9-201ENST00000427694 174 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 TMSB4XP3-201ENST00000445144 114 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL392103.1-201ENST00000447000 198 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNA5SP182-201ENST00000516064 82 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 Y_RNA.692-201ENST00000516627 105 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 MIR3192-201ENST00000584920 77 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL022345.2-201ENST00000606307 135 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL121890.5-201ENST00000620848 304 ntBASIC1.64□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNA5SP48-201ENST00000363969 126 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-309P-201ENST00000364573 106 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 SNORA24-201ENST00000384096 131 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 RN7SKP88-201ENST00000516847 250 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-902P-201ENST00000517212 91 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 Y_RNA.757-201ENST00000578934 114 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 U7.2-201ENST00000607576 63 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 7SK.8-201ENST00000612110 250 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 7SK.11-201ENST00000615477 250 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 TUG1_4.1-201ENST00000619464 181 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 7SK.13-201ENST00000622040 250 ntBASIC1.63□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-508P-201ENST00000363231 103 ntBASIC1.62□□□□□ -2.15
NIPSNAP3AQ9UFN0 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.62□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
NIPSNAP3AQ9UFN0 snoU13.16-201ENST00000459350 104 ntBASIC1.62□□□□□ -2.15
NIPSNAP3AQ9UFN0 AC108210.2-201ENST00000503681 201 ntBASIC1.62□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-295P-201ENST00000516901 104 ntBASIC1.62□□□□□ -2.15
NIPSNAP3AQ9UFN0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
NIPSNAP3AQ9UFN0 Y_RNA.586-201ENST00000391146 98 ntBASIC1.61□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU7-73P-201ENST00000458743 63 ntBASIC1.61□□□□□ -2.15
NIPSNAP3AQ9UFN0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.61□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-548P-201ENST00000517083 115 ntBASIC1.61□□□□□ -2.15
NIPSNAP3AQ9UFN0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
NIPSNAP3AQ9UFN0 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNY1P6-201ENST00000384193 109 ntBASIC1.6□□□□□ -2.15
NIPSNAP3AQ9UFN0 U8.13-201ENST00000390842 128 ntBASIC1.6□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-913P-201ENST00000390913 95 ntBASIC1.6□□□□□ -2.15
NIPSNAP3AQ9UFN0 SNORA26.9-201ENST00000391322 122 ntBASIC1.6□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-237P-201ENST00000515985 71 ntBASIC1.6□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-165P-201ENST00000517170 99 ntBASIC1.6□□□□□ -2.15
NIPSNAP3AQ9UFN0 SNORA25.3-201ENST00000363205 127 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU4-16P-201ENST00000364737 141 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 Y_RNA.294-201ENST00000364916 102 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-690P-201ENST00000365242 106 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
NIPSNAP3AQ9UFN0 RNU6-1211P-201ENST00000459179 105 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms