Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 Y_RNA.66-201ENST00000362862 102 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.71-201ENST00000362892 104 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.634-201ENST00000364811 113 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.343-201ENST00000365354 112 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.393-201ENST00000383936 102 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 SNORA1-201ENST00000384107 130 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 SNORD37.2-201ENST00000391075 66 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 RNU4-43P-201ENST00000410628 137 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 SNORD77.4-201ENST00000516158 81 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 RNU7-116P-201ENST00000516940 62 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 AC007751.1-201ENST00000529260 376 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 MIR3684-201ENST00000579779 74 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 uc_338.4-201ENST00000616635 176 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 AL591926.4-201ENST00000616895 298 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
CLIP2Q9UDT6 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.337-201ENST00000365312 102 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 Y_RNA.521-201ENST00000384560 114 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 MIR548A2-201ENST00000384956 97 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 RNU6-1168P-201ENST00000390831 104 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 AL034345.1-201ENST00000407768 123 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 RPS23P4-201ENST00000487908 423 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 RNU6-197P-201ENST00000516680 100 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 MIR378D2-201ENST00000580636 98 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 MIR6079-201ENST00000635807 62 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 MIR6844-201ENST00000637122 62 ntBASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CLIP2Q9UDT6 AC018630.2-201ENST00000534866 2403 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 RNU6-235P-201ENST00000362644 107 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 RNU6-199P-201ENST00000362954 107 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.116-201ENST00000363292 103 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 RNU6-915P-201ENST00000364943 103 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 SNORA22-201ENST00000383907 134 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.432-201ENST00000384087 111 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 RNU6-1117P-201ENST00000384525 104 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 SNORA40-201ENST00000388090 126 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 RNU6-1154P-201ENST00000391001 104 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 RNU2-51P-201ENST00000410708 197 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.630-201ENST00000411370 108 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 MLLT10P1-201ENST00000418346 262 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 RNU6-1333P-201ENST00000516162 93 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 RNU2-56P-201ENST00000516826 190 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 SUMO2P16-201ENST00000519475 264 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 MIR5688-201ENST00000580619 83 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 Pinc.1-201ENST00000616452 154 ntBASIC1.21□□□□□ -2.22
CLIP2Q9UDT6 SNORD61-201ENST00000384252 73 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 RNU11-5P-201ENST00000391216 129 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 RNA5SP496-201ENST00000391240 109 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 MIR513C-201ENST00000401352 84 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 RNU6-1299P-201ENST00000516316 100 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 RNU6-1270P-201ENST00000517128 108 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
CLIP2Q9UDT6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 RNU6-309P-201ENST00000364573 106 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 SNORD50B-201ENST00000364995 70 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.355-201ENST00000365462 98 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 RNU6-597P-201ENST00000365620 102 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 RNY3P5-201ENST00000384127 102 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 SNORD20-201ENST00000384550 80 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 MIR522-201ENST00000385071 87 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 MIR518E-201ENST00000385252 88 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.651-201ENST00000459380 103 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 AL133373.1-201ENST00000497098 94 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 RNU6-341P-201ENST00000516973 96 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 IGKV1-22-201ENST00000524313 326 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 MIR3129-201ENST00000581095 76 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 AC008507.4-201ENST00000585464 127 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 AC097639.2-201ENST00000603159 172 ntBASIC1.19□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.52-201ENST00000362760 96 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.127-201ENST00000363386 109 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 MIR518F-201ENST00000384973 87 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 MIR660-201ENST00000385235 97 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 SNORA75.5-201ENST00000391291 81 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 RNU2-70P-201ENST00000410718 179 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 SNRPGP14-201ENST00000435400 219 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 OR9P1P-201ENST00000496431 281 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 RNU6-479P-201ENST00000516348 105 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 RNU6-113P-201ENST00000516653 101 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 AC108081.1-201ENST00000604358 221 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 AC103810.9-201ENST00000606688 112 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 SNORA28-201ENST00000606769 126 ntBASIC1.18□□□□□ -2.22
CLIP2Q9UDT6 AC011603.4-201ENST00000611325 277 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms