Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC022254.1-201ENST00000567857 235 ntBASIC1.94□□□□□ -2.1
KCMF1Q9P0J7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 RNU6-476P-201ENST00000384726 107 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 AL035398.1-201ENST00000430869 322 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 RNU6-958P-201ENST00000516995 106 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 MIR4713-201ENST00000582691 75 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 AC021443.1-201ENST00000604478 211 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 MIR7843-201ENST00000622274 79 ntBASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KCMF1Q9P0J7 AC092881.1-201ENST00000638218 2733 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 MTND5P18-201ENST00000445624 1801 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 RNU6-834P-201ENST00000362367 110 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 MIRLET7F2-201ENST00000385277 83 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 SNORA74.3-201ENST00000517108 154 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 AL121890.5-201ENST00000620848 304 ntBASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
KCMF1Q9P0J7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 RNU6-215P-201ENST00000365169 102 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 Y_RNA.346-201ENST00000365385 112 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 SNORA70.7-201ENST00000384159 133 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 RNU6-1144P-201ENST00000384247 104 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 Y_RNA.528-201ENST00000384575 108 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 MIR6129-201ENST00000616087 109 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 AC243994.1-201ENST00000618627 109 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KCMF1Q9P0J7 MIR548A3-201ENST00000385297 97 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 RPS29P29-201ENST00000456396 171 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 RNU7-45P-201ENST00000459460 63 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 SNORA31.4-201ENST00000516049 129 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 AL670379.3-201ENST00000605040 251 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 MIR8074-201ENST00000615081 81 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 AL391516.1-201ENST00000554380 2449 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 ZNF355P-201ENST00000427301 3216 ntBASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KCMF1Q9P0J7 RNU6-429P-201ENST00000384582 108 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 MIR504-201ENST00000385065 83 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 MIR1289-2-201ENST00000408360 111 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNA5SP136-201ENST00000410906 107 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNU7-164P-201ENST00000459221 62 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNU2-13P-201ENST00000515909 113 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNU6-322P-201ENST00000516010 103 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNY4P20-201ENST00000516678 93 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNU7-53P-201ENST00000516705 60 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 MIR4791-201ENST00000607666 84 ntBASIC1.89□□□□□ -2.11
KCMF1Q9P0J7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 MIR653-201ENST00000385279 96 ntBASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 AL451046.2-201ENST00000403074 277 ntBASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 Y_RNA.649-201ENST00000459077 103 ntBASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 SNORA77B-201ENST00000578179 125 ntBASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 MIR4305-201ENST00000583252 102 ntBASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 AC021613.1-201ENST00000623880 111 ntBASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KCMF1Q9P0J7 Y_RNA.298-201ENST00000364960 107 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 SNORA51.10-201ENST00000384418 136 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 MIR520C-201ENST00000385005 87 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 MIR548A1-201ENST00000385041 97 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 RNU7-43P-201ENST00000516554 64 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 RNU6-919P-201ENST00000516731 104 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 RNU6-922P-201ENST00000516753 99 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 MIR4764-201ENST00000580680 88 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
KCMF1Q9P0J7 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 SNORA24-201ENST00000384096 131 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 AL035461.1-201ENST00000421490 332 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 RNU7-123P-201ENST00000515911 60 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 MIR4524B-201ENST00000581569 115 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 MIR8063-201ENST00000621930 81 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 AC008133.2-201ENST00000624540 351 ntBASIC1.86□□□□□ -2.11
KCMF1Q9P0J7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KCMF1Q9P0J7 Y_RNA.81-201ENST00000362997 102 ntBASIC1.85□□□□□ -2.11
KCMF1Q9P0J7 RNU6-44P-201ENST00000384045 107 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms