Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 SNRPGP7-201ENST00000469016 106 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 SNORD116-30-201ENST00000516468 85 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 MIR4762-201ENST00000585261 75 ntBASIC-1.44□□□□□ -2.64
COL12A1Q99715 RNU6-181P-201ENST00000363225 107 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 RNU6-527P-201ENST00000363425 104 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 RNU4-55P-201ENST00000410731 137 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 RNU6-602P-201ENST00000411155 105 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.45□□□□□ -2.64
COL12A1Q99715 EPS15P1-201ENST00000448836 336 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 U7.5-201ENST00000517224 61 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 RNU7-10P-201ENST00000607194 63 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 AF250324.2-201ENST00000608299 610 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.45□□□□□ -2.64
COL12A1Q99715 RNU6-834P-201ENST00000362367 110 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 SNORD115-8-201ENST00000363856 82 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 SNORD113-3-201ENST00000364830 72 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
COL12A1Q99715 USP9YP30-201ENST00000430729 455 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 SNORA31.3-201ENST00000516029 96 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.45□□□□□ -2.64
COL12A1Q99715 MIR548AC-201ENST00000585049 88 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 AC079248.2-201ENST00000623779 326 ntBASIC-1.45□□□□□ -2.64
COL12A1Q99715 SNORD18C-201ENST00000362704 69 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-839P-201ENST00000363347 108 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU4-17P-201ENST00000365598 141 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-816P-201ENST00000390914 107 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU2-29P-201ENST00000410423 189 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-885P-201ENST00000516607 104 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU4-58P-201ENST00000363192 141 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 SNORA72.3-201ENST00000365074 132 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 SNORD115-7-201ENST00000365306 82 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-214P-201ENST00000384130 107 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 AL365203.2-201ENST00000423444 196 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-914P-201ENST00000516749 109 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 AL008718.3-201ENST00000610217 321 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 PISRT1.1-201ENST00000616930 107 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.46□□□□□ -2.64
COL12A1Q99715 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 RNU6-912P-201ENST00000363800 104 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 NDUFB1P2-201ENST00000449477 176 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.46□□□□□ -2.64
COL12A1Q99715 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 AL078596.1-201ENST00000624856 447 ntBASIC-1.46□□□□□ -2.64
COL12A1Q99715 FGF7P2-201ENST00000332473 296 ntBASIC-1.47□□□□□ -2.64
COL12A1Q99715 RNU6-961P-201ENST00000363893 105 ntBASIC-1.47□□□□□ -2.64
COL12A1Q99715 SNORD12C-201ENST00000386307 89 ntBASIC-1.47□□□□□ -2.64
COL12A1Q99715 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-1.47□□□□□ -2.64
COL12A1Q99715 MIR1255B2-201ENST00000408618 67 ntBASIC-1.47□□□□□ -2.64
COL12A1Q99715 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.47□□□□□ -2.64
COL12A1Q99715 AC022878.1-201ENST00000530684 149 ntBASIC-1.47□□□□□ -2.64
COL12A1Q99715 AC090502.2-201ENST00000549267 280 ntBASIC-1.47□□□□□ -2.64
COL12A1Q99715 AL450270.1-201ENST00000606160 391 ntBASIC-1.47□□□□□ -2.64
COL12A1Q99715 RNY1P16-201ENST00000363063 111 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 RNY1P1-201ENST00000364372 112 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 RNU6-522P-201ENST00000364497 107 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 RNU6-767P-201ENST00000384132 107 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 RNU6-630P-201ENST00000391258 106 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 AC004386.2-201ENST00000441858 148 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 AC097635.1-201ENST00000450678 155 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 RNU7-182P-201ENST00000459009 62 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 RNU6-781P-201ENST00000516377 101 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 AL118558.2-201ENST00000556294 238 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 MIR3646-201ENST00000578301 84 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 MIR8055-201ENST00000610739 97 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 AC078880.5-201ENST00000617845 421 ntBASIC-1.47□□□□□ -2.65
COL12A1Q99715 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 MIR208B-201ENST00000401172 77 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 MTCO2P5-201ENST00000422621 426 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU7-172P-201ENST00000517125 64 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 MIR548AG2-201ENST00000581228 64 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 MIR3920-201ENST00000581751 86 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 PIGPP4-201ENST00000584447 307 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 U3.4-201ENST00000363352 213 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU6-626P-201ENST00000363354 107 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU7-67P-201ENST00000459003 62 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 AC139453.2-201ENST00000487255 133 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 MTCO3P42-201ENST00000509488 518 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 AC009878.1-201ENST00000621819 340 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU6-552P-201ENST00000362869 119 ntBASIC-1.48□□□□□ -2.65
COL12A1Q99715 RNU6-853P-201ENST00000364306 107 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms