Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORA70B-201ENST00000384210 135 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 RNU6-424P-201ENST00000384367 105 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 AC003685.2-201ENST00000422795 395 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 UBL5P3-201ENST00000475112 231 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 AC108729.3-201ENST00000513484 108 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 MIR376B-201ENST00000614515 100 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 MIR8054-201ENST00000620877 86 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 U4.3-201ENST00000621047 82 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.66□□□□□ -1.98
SHKBP1Q8TBC3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SHKBP1Q8TBC3 RNA5SP493-201ENST00000364115 91 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-220P-201ENST00000390919 107 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 SNORA26.6-201ENST00000391256 115 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 SNORA3.2-201ENST00000408221 125 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 AC090844.1-201ENST00000422019 156 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 AC007336.1-201ENST00000576365 3828 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 MIR3169-201ENST00000578032 83 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 MIR3152-201ENST00000579801 74 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHKBP1Q8TBC3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHKBP1Q8TBC3 Y_RNA.247-201ENST00000364500 92 ntBASIC2.64□□□□□ -1.99
SHKBP1Q8TBC3 Y_RNA.607-201ENST00000410597 98 ntBASIC2.64□□□□□ -1.99
SHKBP1Q8TBC3 RN7SKP192-201ENST00000411291 327 ntBASIC2.64□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
SHKBP1Q8TBC3 MIR6715A-201ENST00000615929 79 ntBASIC2.64□□□□□ -1.99
SHKBP1Q8TBC3 AC022513.1-201ENST00000624512 117 ntBASIC2.64□□□□□ -1.99
SHKBP1Q8TBC3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.64□□□□□ -1.99
SHKBP1Q8TBC3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-633P-201ENST00000362612 103 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 RNA5SP210-201ENST00000391034 120 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 RNU7-34P-201ENST00000459394 64 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 SNORA31.10-201ENST00000516482 106 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-56P-201ENST00000516986 93 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 AC104984.5-201ENST00000586878 94 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 SNORA28-201ENST00000606769 126 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 AC103810.7-201ENST00000607821 91 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 AL137847.3-201ENST00000611521 109 ntBASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHKBP1Q8TBC3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 Y_RNA.316-201ENST00000365118 111 ntBASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 RNU1-101P-201ENST00000391171 127 ntBASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 UBL5P1-201ENST00000507979 193 ntBASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-1006P-201ENST00000516998 103 ntBASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-86P-201ENST00000606534 107 ntBASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 ZNF658B-202ENST00000615961 3375 ntBASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.62□□□□□ -1.99
SHKBP1Q8TBC3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 AC245060.5-201ENST00000610778 3293 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 Y_RNA.94-201ENST00000363068 106 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-1163P-201ENST00000364516 107 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 SNORA32-201ENST00000384072 121 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 MIR6717-201ENST00000622747 73 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-833P-201ENST00000363486 107 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 SNORD114-30-201ENST00000364448 72 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 SNORA1.2-201ENST00000365189 134 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 SNORA70.7-201ENST00000384159 133 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-788P-201ENST00000390967 104 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 RNU4-53P-201ENST00000410828 140 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 RNU7-53P-201ENST00000516705 60 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-958P-201ENST00000516995 106 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 DNAJC19P9-201ENST00000555084 351 ntBASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.6□□□□□ -1.99
SHKBP1Q8TBC3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 U8.2-201ENST00000363156 134 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 SNORA24-201ENST00000384096 131 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 U8.16-201ENST00000391279 133 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 AL359511.1-201ENST00000402970 211 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 RNA5SP261-201ENST00000410536 106 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 Y_RNA.609-201ENST00000410669 89 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 Z98742.3-201ENST00000418637 326 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 SEPT14P17-201ENST00000617978 177 ntBASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.59□□□□□ -1.99
SHKBP1Q8TBC3 RNU6-23P-201ENST00000363283 107 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms