Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 Y_RNA.173-201ENST00000363776 113 ntBASIC3□□□□□ -1.93
RETREG3Q86VR2 RNU6-480P-201ENST00000384332 107 ntBASIC3□□□□□ -1.93
RETREG3Q86VR2 MIR181B2-201ENST00000385004 89 ntBASIC3□□□□□ -1.93
RETREG3Q86VR2 MIR520C-201ENST00000385005 87 ntBASIC3□□□□□ -1.93
RETREG3Q86VR2 HMGN2P39-201ENST00000398005 273 ntBASIC3□□□□□ -1.93
RETREG3Q86VR2 SNORA11.1-201ENST00000408133 129 ntBASIC3□□□□□ -1.93
RETREG3Q86VR2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3□□□□□ -1.93
RETREG3Q86VR2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3□□□□□ -1.93
RETREG3Q86VR2 AC006023.1-201ENST00000603944 259 ntBASIC3□□□□□ -1.93
RETREG3Q86VR2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RETREG3Q86VR2 AC108206.1-201ENST00000570186 4159 ntBASIC3□□□□□ -1.93
RETREG3Q86VR2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3□□□□□ -1.93
RETREG3Q86VR2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RETREG3Q86VR2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.99□□□□□ -1.93
RETREG3Q86VR2 SNORD115-37-201ENST00000363768 82 ntBASIC2.99□□□□□ -1.93
RETREG3Q86VR2 MIR889-201ENST00000401280 79 ntBASIC2.99□□□□□ -1.93
RETREG3Q86VR2 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.99□□□□□ -1.93
RETREG3Q86VR2 RNU6-613P-201ENST00000410412 108 ntBASIC2.99□□□□□ -1.93
RETREG3Q86VR2 AC093729.1-201ENST00000513074 128 ntBASIC2.99□□□□□ -1.93
RETREG3Q86VR2 AP001362.1-201ENST00000625165 124 ntBASIC2.99□□□□□ -1.93
RETREG3Q86VR2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.98□□□□□ -1.93
RETREG3Q86VR2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
RETREG3Q86VR2 SNORA70.4-201ENST00000365509 134 ntBASIC2.98□□□□□ -1.93
RETREG3Q86VR2 MIR183-201ENST00000384958 110 ntBASIC2.98□□□□□ -1.93
RETREG3Q86VR2 AC011753.1-201ENST00000451001 220 ntBASIC2.98□□□□□ -1.93
RETREG3Q86VR2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.98□□□□□ -1.93
RETREG3Q86VR2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.98□□□□□ -1.93
RETREG3Q86VR2 MIR4712-201ENST00000583750 82 ntBASIC2.98□□□□□ -1.93
RETREG3Q86VR2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.98□□□□□ -1.93
RETREG3Q86VR2 U6.105-201ENST00000637379 88 ntBASIC2.98□□□□□ -1.93
RETREG3Q86VR2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RETREG3Q86VR2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RETREG3Q86VR2 MIR23A-201ENST00000385245 73 ntBASIC2.97□□□□□ -1.93
RETREG3Q86VR2 RN7SL20P-201ENST00000488827 297 ntBASIC2.97□□□□□ -1.93
RETREG3Q86VR2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.97□□□□□ -1.93
RETREG3Q86VR2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.97□□□□□ -1.93
RETREG3Q86VR2 MIR548AO-201ENST00000579992 96 ntBASIC2.97□□□□□ -1.93
RETREG3Q86VR2 AC020891.4-201ENST00000605745 93 ntBASIC2.97□□□□□ -1.93
RETREG3Q86VR2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RETREG3Q86VR2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
RETREG3Q86VR2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RETREG3Q86VR2 Y_RNA.168-201ENST00000363740 102 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 Y_RNA.333-201ENST00000365274 102 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 U8.9-201ENST00000365667 134 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 SNORD38B-201ENST00000384690 67 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 RNA5SP237-201ENST00000410414 113 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 AP004217.1-201ENST00000480579 346 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 RNU6-917P-201ENST00000516294 104 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.96□□□□□ -1.94
RETREG3Q86VR2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.96□□□□□ -1.94
RETREG3Q86VR2 MIR7975-201ENST00000619350 68 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 SNORD38B-202ENST00000625943 69 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 SCARNA15.3-201ENST00000626315 122 ntBASIC2.96□□□□□ -1.94
RETREG3Q86VR2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RETREG3Q86VR2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.95□□□□□ -1.94
RETREG3Q86VR2 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 RNY1P13-201ENST00000365030 105 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 RNU1-51P-201ENST00000365345 176 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 RNU1-138P-201ENST00000384093 164 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 SNORA2B-201ENST00000384583 137 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 MIR490-201ENST00000384865 128 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 AC133485.1-201ENST00000567176 124 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 AC007179.3-201ENST00000604976 235 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 U1.36-201ENST00000620684 176 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 MIR4251-201ENST00000635819 61 ntBASIC2.95□□□□□ -1.94
RETREG3Q86VR2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RETREG3Q86VR2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RETREG3Q86VR2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
RETREG3Q86VR2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RETREG3Q86VR2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RETREG3Q86VR2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
RETREG3Q86VR2 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
RETREG3Q86VR2 RNU6-519P-201ENST00000410590 108 ntBASIC2.94□□□□□ -1.94
RETREG3Q86VR2 RPL23AP83-201ENST00000434984 473 ntBASIC2.94□□□□□ -1.94
RETREG3Q86VR2 AC027119.1-201ENST00000440877 241 ntBASIC2.94□□□□□ -1.94
RETREG3Q86VR2 MIR4658-201ENST00000584344 65 ntBASIC2.94□□□□□ -1.94
RETREG3Q86VR2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RETREG3Q86VR2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RETREG3Q86VR2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.94□□□□□ -1.94
RETREG3Q86VR2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RETREG3Q86VR2 MIR208A-201ENST00000362287 71 ntBASIC2.93□□□□□ -1.94
RETREG3Q86VR2 RN7SL499P-201ENST00000481141 276 ntBASIC2.93□□□□□ -1.94
RETREG3Q86VR2 SNORA70.24-201ENST00000517233 118 ntBASIC2.93□□□□□ -1.94
RETREG3Q86VR2 MIR3935-201ENST00000583472 104 ntBASIC2.93□□□□□ -1.94
RETREG3Q86VR2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RETREG3Q86VR2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
RETREG3Q86VR2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RETREG3Q86VR2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RETREG3Q86VR2 AC019129.1-201ENST00000403786 261 ntBASIC2.92□□□□□ -1.94
RETREG3Q86VR2 RNA5SP270-201ENST00000411361 118 ntBASIC2.92□□□□□ -1.94
RETREG3Q86VR2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.92□□□□□ -1.94
RETREG3Q86VR2 RPS29P6-201ENST00000438196 145 ntBASIC2.92□□□□□ -1.94
RETREG3Q86VR2 AC139453.2-201ENST00000487255 133 ntBASIC2.92□□□□□ -1.94
RETREG3Q86VR2 RN7SL633P-201ENST00000488974 297 ntBASIC2.92□□□□□ -1.94
RETREG3Q86VR2 AC141846.1-201ENST00000568348 142 ntBASIC2.92□□□□□ -1.94
RETREG3Q86VR2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.92□□□□□ -1.94
RETREG3Q86VR2 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
RETREG3Q86VR2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
RETREG3Q86VR2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RETREG3Q86VR2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms