Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL596211.1-201ENST00000569873 2277 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 AL157777.2-201ENST00000258070 137 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 RNU1-133P-201ENST00000364867 167 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 SNORA19-201ENST00000384737 128 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 RNU6-1067P-201ENST00000384752 107 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 RNU7-67P-201ENST00000459003 62 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 Y_RNA.651-201ENST00000459380 103 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 SNORD111.1-201ENST00000516421 86 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 RNU6-958P-201ENST00000516995 106 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 Y_RNA.757-201ENST00000578934 114 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 MIR3121-201ENST00000579680 77 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 MIR3937-201ENST00000580135 106 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 GHRLOS.1-201ENST00000610995 70 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 AC243994.1-201ENST00000618627 109 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 AC008133.2-201ENST00000624540 351 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PTCHD4Q6ZW05 MIR539-201ENST00000365690 78 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 SNORA70.7-201ENST00000384159 133 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 Y_RNA.454-201ENST00000384224 113 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 Y_RNA.537-201ENST00000384626 109 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 AL035398.1-201ENST00000430869 322 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 RPS29P29-201ENST00000456396 171 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 RNU2-11P-201ENST00000459191 187 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 UBL5P3-201ENST00000475112 231 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 RNU7-41P-201ENST00000515917 61 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 RNA5SP182-201ENST00000516064 82 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
PTCHD4Q6ZW05 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 SNORA24-201ENST00000384096 131 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 SNORA51.10-201ENST00000384418 136 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 RNU6-959P-201ENST00000384671 107 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 SNORA40.18-201ENST00000391200 128 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 RNU1-78P-201ENST00000391248 165 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 AC027119.1-201ENST00000440877 241 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 RNU1-41P-201ENST00000516161 162 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 RNU1-48P-201ENST00000516400 162 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 AL357312.1-201ENST00000603879 298 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
PTCHD4Q6ZW05 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 MIR302B-201ENST00000362188 73 ntBASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 SNORD114-1-201ENST00000362705 72 ntBASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 Y_RNA.114-201ENST00000363265 113 ntBASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 SNORA70B-201ENST00000384210 135 ntBASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 SNORA59A-201ENST00000459326 152 ntBASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 SNORA31.4-201ENST00000516049 129 ntBASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-947P-201ENST00000516264 106 ntBASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 AC084768.2-201ENST00000622736 221 ntBASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PTCHD4Q6ZW05 Y_RNA.218-201ENST00000364218 104 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-1065P-201ENST00000384513 106 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 AL606753.1-201ENST00000427435 87 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 RNU7-53P-201ENST00000516705 60 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-1234P-201ENST00000516877 103 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 MIR3192-201ENST00000584920 77 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 HSPE1P19-201ENST00000603327 295 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 AL096861.1-201ENST00000610899 123 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 U2.22-201ENST00000636441 106 ntBASIC1.51□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-349P-201ENST00000362402 107 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-235P-201ENST00000362644 107 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 Y_RNA.280-201ENST00000364765 112 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 RNY1P6-201ENST00000384193 109 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 MIR583-201ENST00000384846 75 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-913P-201ENST00000390913 95 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 RNU7-45P-201ENST00000459460 63 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-240P-201ENST00000516098 97 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 AC108081.1-201ENST00000604358 221 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 MIR4251-201ENST00000635819 61 ntBASIC1.5□□□□□ -2.17
PTCHD4Q6ZW05 Y_RNA.71-201ENST00000362892 104 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 RNU4-16P-201ENST00000364737 141 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 RNA5SP126-201ENST00000365092 109 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-690P-201ENST00000365242 106 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 SNORD113-1-201ENST00000365321 69 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 AL158147.1-201ENST00000443970 75 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-113P-201ENST00000516653 101 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
PTCHD4Q6ZW05 U8.13-201ENST00000390842 128 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 AC245517.4-201ENST00000448601 281 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 RPL39P39-201ENST00000455840 151 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 RNU7-73P-201ENST00000458743 63 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 snoU13.16-201ENST00000459350 104 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 RPL30P7-201ENST00000479312 323 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 RPL23AP94-201ENST00000512518 302 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 RNA5SP445-201ENST00000515889 115 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 AL512310.8-201ENST00000550183 120 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 MIR3664-201ENST00000579074 99 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 MIR4513-201ENST00000581077 86 ntBASIC1.48□□□□□ -2.17
PTCHD4Q6ZW05 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-647P-201ENST00000364243 107 ntBASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 Y_RNA.366-201ENST00000365540 102 ntBASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-80P-201ENST00000384195 107 ntBASIC1.47□□□□□ -2.17
PTCHD4Q6ZW05 RNU6-1117P-201ENST00000384525 104 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms