Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL591926.4-201ENST00000616895 298 ntBASIC1.16□□□□□ -2.22
COL16A1Q07092 MIR126-201ENST00000362291 85 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 RNU6-597P-201ENST00000365620 102 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 RNU6-1117P-201ENST00000384525 104 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 SNORA20-201ENST00000384662 132 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 SNORA12.1-201ENST00000390873 148 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 RNU6-360P-201ENST00000390944 104 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 AC245047.3-201ENST00000429428 127 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.15□□□□□ -2.22
COL16A1Q07092 SNORD77.4-201ENST00000516158 81 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 RNU7-28P-201ENST00000516759 62 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 RNU7-128P-201ENST00000517247 62 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 MIR6079-201ENST00000635807 62 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 MIR3658-201ENST00000636291 56 ntBASIC1.15□□□□□ -2.22
COL16A1Q07092 Y_RNA.66-201ENST00000362862 102 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 SNORA33-201ENST00000363664 130 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 VTRNA1-3-201ENST00000365645 89 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 RNU6-442P-201ENST00000383968 104 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 MIR522-201ENST00000385071 87 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 Y_RNA.584-201ENST00000391090 114 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 HMGN2P39-201ENST00000398005 273 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 MIR1197-201ENST00000408818 88 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.15□□□□□ -2.23
COL16A1Q07092 SNORA25.12-201ENST00000516202 82 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 RNA5SP153-201ENST00000516498 76 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 RNU6-62P-201ENST00000516526 102 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.15□□□□□ -2.23
COL16A1Q07092 MIR4529-201ENST00000578110 78 ntBASIC1.15□□□□□ -2.23
COL16A1Q07092 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.15□□□□□ -2.23
COL16A1Q07092 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
COL16A1Q07092 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
COL16A1Q07092 Y_RNA.253-201ENST00000364562 112 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 RNU6-1138P-201ENST00000365359 106 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 RNU6-1336P-201ENST00000383886 109 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 RNU6-80P-201ENST00000384195 107 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 RNU6-22P-201ENST00000384355 107 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 RNU6-1081P-201ENST00000384537 107 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 MIR518A2-201ENST00000384966 87 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 SNORA40-201ENST00000388090 126 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
COL16A1Q07092 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.14□□□□□ -2.23
COL16A1Q07092 Y_RNA.666-201ENST00000516187 112 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.14□□□□□ -2.23
COL16A1Q07092 AC133485.1-201ENST00000567176 124 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 AC138907.6-201ENST00000568401 126 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 MIR4662B-201ENST00000579498 81 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 MIR3121-201ENST00000579680 77 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 MIR548AI-201ENST00000579940 88 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.14□□□□□ -2.23
COL16A1Q07092 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.13□□□□□ -2.23
COL16A1Q07092 Y_RNA.91-201ENST00000363042 107 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 SNORA1-201ENST00000384107 130 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 RNA5SP109-201ENST00000391010 116 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 MIR891A-201ENST00000401237 79 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 RNU6-257P-201ENST00000410238 98 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
COL16A1Q07092 MTND4LP9-201ENST00000427694 174 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 RNU7-12P-201ENST00000516030 62 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 RNU6-970P-201ENST00000516312 107 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 MIR4762-201ENST00000585261 75 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 AC134878.1-201ENST00000619901 243 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 U1.36-201ENST00000620684 176 ntBASIC1.13□□□□□ -2.23
COL16A1Q07092 Y_RNA.71-201ENST00000362892 104 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 RNU6-309P-201ENST00000364573 106 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 SNORD61-201ENST00000384252 73 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 RNU6-163P-201ENST00000384396 106 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
COL16A1Q07092 AC069257.2-201ENST00000441819 155 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.12□□□□□ -2.23
COL16A1Q07092 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 RNVU1-2-201ENST00000516326 135 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.12□□□□□ -2.23
COL16A1Q07092 AC069114.2-201ENST00000604699 304 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 AL773524.1-201ENST00000614065 229 ntBASIC1.12□□□□□ -2.23
COL16A1Q07092 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.11□□□□□ -2.23
COL16A1Q07092 RNU6-833P-201ENST00000363486 107 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 Y_RNA.294-201ENST00000364916 102 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 MIR597-201ENST00000384968 97 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 SNORD72-201ENST00000390994 80 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 RNU6-460P-201ENST00000391158 108 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 AC245047.4-201ENST00000433189 144 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 TMSB4XP3-201ENST00000445144 114 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 NDUFA4P2-201ENST00000489989 244 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 Y_RNA.692-201ENST00000516627 105 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 SNORD45.4-201ENST00000516629 73 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 MIR4299-201ENST00000577899 72 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 MIR3129-201ENST00000581095 76 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 AC131055.1-201ENST00000584626 316 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 AC008507.4-201ENST00000585464 127 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 SNORA28-201ENST00000606769 126 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 AC006441.5-201ENST00000612680 209 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 TUG1_4.1-201ENST00000619464 181 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 AP001340.1-201ENST00000624405 217 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.11□□□□□ -2.23
COL16A1Q07092 SNORA25.7-201ENST00000364375 127 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 SNORD38C-201ENST00000384381 69 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 MIR520A-201ENST00000384862 85 ntBASIC1.11□□□□□ -2.23
COL16A1Q07092 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms