| APLP1 | P51693 | SPINT5P-201 | ENST00000448174 | 155 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC018868.1-201 | ENST00000491307 | 315 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| APLP1 | P51693 | VTRNA2-2P-201 | ENST00000516091 | 103 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| APLP1 | P51693 | PLD1-217 | ENST00000627725 | 174 nt | TSL 5 BASIC | 3.52 | □□□□□ -1.85 | | |
| APLP1 | P51693 | CEP44-203 | ENST00000426172 | 3037 nt | TSL 5 BASIC | 3.52 | □□□□□ -1.85 | | |
| APLP1 | P51693 | ZNF567-201 | ENST00000360729 | 2691 nt | TSL 1 (best) BASIC | 3.52 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MAP4K3-205 | ENST00000437545 | 3924 nt | TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | ADGRG4-203 | ENST00000394143 | 9931 nt | APPRIS P2 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC007336.1-201 | ENST00000576365 | 3828 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC025164.2-202 | ENST00000499685 | 5699 nt | TSL 3 BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | Y_RNA.173-201 | ENST00000363776 | 113 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-480P-201 | ENST00000384332 | 107 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MIR512-1-201 | ENST00000384913 | 84 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MIR489-201 | ENST00000384923 | 84 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MIR1236-201 | ENST00000408340 | 102 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU7-35P-201 | ENST00000517174 | 62 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | KIAA0586-209 | ENST00000556134 | 5912 nt | APPRIS ALT2 TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AL021368.2-201 | ENST00000606125 | 5352 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | Y_RNA.57-201 | ENST00000362806 | 113 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-478P-201 | ENST00000363904 | 110 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MIR9-1-201 | ENST00000385198 | 89 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | SNORA40.18-201 | ENST00000391200 | 128 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-519P-201 | ENST00000410590 | 108 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC125388.1-201 | ENST00000459631 | 156 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC023141.11-201 | ENST00000508864 | 202 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-1053P-201 | ENST00000515930 | 101 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | SNORA25.13-201 | ENST00000516395 | 103 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | PRKACB-207 | ENST00000394838 | 4294 nt | TSL 5 BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC093831.2-201 | ENST00000624393 | 3427 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| APLP1 | P51693 | FAM46D-201 | ENST00000308293 | 3011 nt | APPRIS P1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | PIK3C2G-206 | ENST00000538779 | 4963 nt | TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | DOPEY1-203 | ENST00000369739 | 7743 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | PRKAA2-201 | ENST00000371244 | 9347 nt | APPRIS P2 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | Y_RNA.168-201 | ENST00000363740 | 102 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-461P-201 | ENST00000364195 | 107 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | Y_RNA.448-201 | ENST00000384185 | 108 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-1072P-201 | ENST00000384703 | 107 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-443P-201 | ENST00000384780 | 107 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | SNORA26.7-201 | ENST00000391288 | 122 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | SNORA11.4-201 | ENST00000408823 | 129 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC018511.2-201 | ENST00000413431 | 189 nt | TSL 3 BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | ADGRV1-201 | ENST00000405460 | 19557 nt | APPRIS P1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AGL-205 | ENST00000370163 | 7166 nt | APPRIS P1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MIR181B2-201 | ENST00000385004 | 89 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-913P-201 | ENST00000390913 | 95 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-447P-201 | ENST00000410293 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-1118P-201 | ENST00000410382 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-1076P-201 | ENST00000410397 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-355P-201 | ENST00000410427 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-791P-201 | ENST00000410467 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-705P-201 | ENST00000410601 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-1100P-201 | ENST00000410691 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-860P-201 | ENST00000410860 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-1217P-201 | ENST00000411276 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-785P-201 | ENST00000411324 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | PNRC2-204 | ENST00000579103 | 171 nt | TSL 2 BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MIR4781-201 | ENST00000585250 | 76 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | U6.90-201 | ENST00000614007 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | U6.70-201 | ENST00000620287 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MME-216 | ENST00000615825 | 5523 nt | APPRIS P1 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| APLP1 | P51693 | CEP85L-202 | ENST00000368488 | 7118 nt | TSL 5 BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-624P-201 | ENST00000363411 | 107 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-342P-201 | ENST00000384521 | 104 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MIR7-2-201 | ENST00000384970 | 110 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | MIR452-201 | ENST00000385020 | 85 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-380P-201 | ENST00000410207 | 107 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | CST9LP2-201 | ENST00000437612 | 320 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | RNU6-871P-201 | ENST00000516122 | 100 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | AC012676.2-201 | ENST00000619258 | 186 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | Y_RNA.788-201 | ENST00000622394 | 112 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | HIF1A-212 | ENST00000557538 | 3468 nt | TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | VPS13C-203 | ENST00000395896 | 14579 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| APLP1 | P51693 | KCNJ16-203 | ENST00000392671 | 3981 nt | APPRIS P1 TSL 2 BASIC | 3.46 | □□□□□ -1.85 | | |
| APLP1 | P51693 | TRDN-201 | ENST00000334268 | 4770 nt | APPRIS P3 TSL 1 (best) BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | RNA5SP493-201 | ENST00000364115 | 91 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | AC245047.7-201 | ENST00000440265 | 293 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | RNU7-153P-201 | ENST00000516455 | 62 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | AC024610.1-201 | ENST00000582685 | 323 nt | TSL 3 BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | Hammerhead_HH9.1-201 | ENST00000616606 | 77 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | AC243994.1-201 | ENST00000618627 | 109 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | MIR7153-201 | ENST00000637758 | 57 nt | BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | MACF1-201 | ENST00000289893 | 19141 nt | TSL 5 BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | ROS1-202 | ENST00000368508 | 7435 nt | APPRIS P2 TSL 1 (best) BASIC | 3.46 | □□□□□ -1.86 | | |
| APLP1 | P51693 | AC245060.5-201 | ENST00000610778 | 3293 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | MIR30E-201 | ENST00000362104 | 92 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | RNA5SP138-201 | ENST00000365098 | 114 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | SNORA25B-201 | ENST00000365507 | 128 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | MIR136-201 | ENST00000385207 | 82 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | TRAV39-201 | ENST00000390466 | 331 nt | APPRIS P1 BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | HMGN2P23-201 | ENST00000456759 | 269 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | RNU6-557P-201 | ENST00000516842 | 110 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | MTND5P40-201 | ENST00000559945 | 246 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | MIR4498-201 | ENST00000577599 | 66 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | FAM106DP-201 | ENST00000586416 | 501 nt | BASIC | 3.45 | □□□□□ -1.86 | | |
| APLP1 | P51693 | AC020891.4-201 | ENST00000605745 | 93 nt | BASIC | 3.45 | □□□□□ -1.86 | | |