Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF144AP50876 RNA5SP374-201ENST00000362939 125 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 SNORD114-10-201ENST00000363409 72 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 MIR660-201ENST00000385235 97 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-447P-201ENST00000410293 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-1118P-201ENST00000410382 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-1076P-201ENST00000410397 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-355P-201ENST00000410427 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-791P-201ENST00000410467 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-705P-201ENST00000410601 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-1100P-201ENST00000410691 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-860P-201ENST00000410860 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-1217P-201ENST00000411276 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RNU6-785P-201ENST00000411324 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 RPL23AP83-201ENST00000434984 473 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 UBBP3-201ENST00000445497 241 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 SNORA70.24-201ENST00000517233 118 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.83□□□□□ -1.96
RNF144AP50876 MIR4709-201ENST00000577272 72 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.83□□□□□ -1.96
RNF144AP50876 U6.90-201ENST00000614007 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 AC012676.2-201ENST00000619258 186 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 U6.70-201ENST00000620287 104 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 AC007318.2-201ENST00000620999 243 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 AL513423.1-201ENST00000621695 132 ntBASIC2.83□□□□□ -1.96
RNF144AP50876 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF144AP50876 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RNF144AP50876 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.83□□□□□ -1.96
RNF144AP50876 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF144AP50876 Y_RNA.98-201ENST00000363109 102 ntBASIC2.82□□□□□ -1.96
RNF144AP50876 SNORA38.1-201ENST00000364172 131 ntBASIC2.82□□□□□ -1.96
RNF144AP50876 RNU6-480P-201ENST00000384332 107 ntBASIC2.82□□□□□ -1.96
RNF144AP50876 MIR181B2-201ENST00000385004 89 ntBASIC2.82□□□□□ -1.96
RNF144AP50876 MIR23A-201ENST00000385245 73 ntBASIC2.82□□□□□ -1.96
RNF144AP50876 RNU7-48P-201ENST00000458875 63 ntBASIC2.82□□□□□ -1.96
RNF144AP50876 RNU7-137P-201ENST00000516788 62 ntBASIC2.82□□□□□ -1.96
RNF144AP50876 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RNF144AP50876 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF144AP50876 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RNF144AP50876 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF144AP50876 Y_RNA.173-201ENST00000363776 113 ntBASIC2.81□□□□□ -1.96
RNF144AP50876 SNORD15B-201ENST00000384714 146 ntBASIC2.81□□□□□ -1.96
RNF144AP50876 RNA5SP274-201ENST00000410484 108 ntBASIC2.81□□□□□ -1.96
RNF144AP50876 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
RNF144AP50876 RNVU1-2-201ENST00000516326 135 ntBASIC2.81□□□□□ -1.96
RNF144AP50876 RN7SKP57-201ENST00000517248 293 ntBASIC2.81□□□□□ -1.96
RNF144AP50876 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF144AP50876 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF144AP50876 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.81□□□□□ -1.96
RNF144AP50876 Z97988.1-201ENST00000637697 135 ntBASIC2.81□□□□□ -1.96
RNF144AP50876 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF144AP50876 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RNF144AP50876 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF144AP50876 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF144AP50876 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF144AP50876 SNORA9-201ENST00000384215 133 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 SNORA54-201ENST00000384281 123 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 Y_RNA.565-201ENST00000384719 101 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 MIR491-201ENST00000384877 84 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 RNU6-602P-201ENST00000411155 105 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 HMGN2P3-201ENST00000433603 273 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 HMGN2P5-201ENST00000436882 273 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 RN7SKP132-201ENST00000516001 208 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 SNORA74.3-201ENST00000517108 154 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 RNA5SP437-201ENST00000517249 129 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 AL161756.2-201ENST00000604597 246 ntBASIC2.8□□□□□ -1.96
RNF144AP50876 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF144AP50876 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF144AP50876 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RNF144AP50876 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF144AP50876 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RNF144AP50876 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 MIR22-201ENST00000362190 85 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 Y_RNA.168-201ENST00000363740 102 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 SNORA7.4-201ENST00000384249 137 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 RNU6-1237P-201ENST00000384777 107 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 RNU4-47P-201ENST00000410876 114 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 CYP3A52P-201ENST00000563326 91 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF144AP50876 AC020891.4-201ENST00000605745 93 ntBASIC2.79□□□□□ -1.96
RNF144AP50876 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF144AP50876 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.78□□□□□ -1.96
RNF144AP50876 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RNF144AP50876 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RNF144AP50876 RNU6-519P-201ENST00000410590 108 ntBASIC2.78□□□□□ -1.96
RNF144AP50876 AC092427.1-202ENST00000430569 476 ntBASIC2.78□□□□□ -1.96
RNF144AP50876 snoU13.27-201ENST00000459278 104 ntBASIC2.78□□□□□ -1.96
RNF144AP50876 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.78□□□□□ -1.96
RNF144AP50876 AC140658.3-201ENST00000567603 271 ntBASIC2.78□□□□□ -1.96
RNF144AP50876 AC145423.2-201ENST00000610631 239 ntBASIC2.78□□□□□ -1.96
RNF144AP50876 MIR3651-201ENST00000630427 90 ntBASIC2.78□□□□□ -1.96
RNF144AP50876 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RNF144AP50876 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF144AP50876 RNU1-148P-201ENST00000384472 162 ntBASIC2.77□□□□□ -1.97
RNF144AP50876 MIR483-201ENST00000385070 76 ntBASIC2.77□□□□□ -1.97
RNF144AP50876 MIR5004-201ENST00000579078 107 ntBASIC2.77□□□□□ -1.97
RNF144AP50876 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.77□□□□□ -1.97
RNF144AP50876 AP001362.1-201ENST00000625165 124 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms