Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL137847.3-201ENST00000611521 109 ntBASIC3.21□□□□□ -1.9
CLCN1P35523 IGLL4P-201ENST00000614590 133 ntBASIC3.21□□□□□ -1.9
CLCN1P35523 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCN1P35523 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLCN1P35523 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCN1P35523 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCN1P35523 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.2□□□□□ -1.9
CLCN1P35523 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCN1P35523 RNA5SP374-201ENST00000362939 125 ntBASIC3.19□□□□□ -1.9
CLCN1P35523 Y_RNA.219-201ENST00000364232 113 ntBASIC3.19□□□□□ -1.9
CLCN1P35523 Y_RNA.467-201ENST00000384297 102 ntBASIC3.19□□□□□ -1.9
CLCN1P35523 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CLCN1P35523 AC245047.7-201ENST00000440265 293 ntBASIC3.19□□□□□ -1.9
CLCN1P35523 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCN1P35523 AC108729.3-201ENST00000513484 108 ntBASIC3.19□□□□□ -1.9
CLCN1P35523 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCN1P35523 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCN1P35523 MIR3605-201ENST00000583214 100 ntBASIC3.19□□□□□ -1.9
CLCN1P35523 MIR512-1-201ENST00000384913 84 ntBASIC3.18□□□□□ -1.9
CLCN1P35523 AL451046.2-201ENST00000403074 277 ntBASIC3.18□□□□□ -1.9
CLCN1P35523 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
CLCN1P35523 RNU6-638P-201ENST00000516582 104 ntBASIC3.18□□□□□ -1.9
CLCN1P35523 AC006386.2-201ENST00000624491 75 ntBASIC3.18□□□□□ -1.9
CLCN1P35523 AC012005.1-201ENST00000624575 75 ntBASIC3.18□□□□□ -1.9
CLCN1P35523 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCN1P35523 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCN1P35523 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCN1P35523 SNORD115-35-201ENST00000365122 82 ntBASIC3.17□□□□□ -1.9
CLCN1P35523 Y_RNA.510-201ENST00000384511 114 ntBASIC3.17□□□□□ -1.9
CLCN1P35523 RNU6-887P-201ENST00000410660 100 ntBASIC3.17□□□□□ -1.9
CLCN1P35523 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.17□□□□□ -1.9
CLCN1P35523 RNU7-2P-201ENST00000516096 62 ntBASIC3.17□□□□□ -1.9
CLCN1P35523 MIR4446-201ENST00000578505 67 ntBASIC3.17□□□□□ -1.9
CLCN1P35523 SNORD14A-201ENST00000606526 91 ntBASIC3.17□□□□□ -1.9
CLCN1P35523 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLCN1P35523 SNORA71.1-201ENST00000364523 117 ntBASIC3.16□□□□□ -1.9
CLCN1P35523 RNU6-342P-201ENST00000384521 104 ntBASIC3.16□□□□□ -1.9
CLCN1P35523 SNORD78.1-201ENST00000390866 65 ntBASIC3.16□□□□□ -1.9
CLCN1P35523 RNU6-972P-201ENST00000391208 107 ntBASIC3.16□□□□□ -1.9
CLCN1P35523 AC022137.1-201ENST00000483735 151 ntBASIC3.16□□□□□ -1.9
CLCN1P35523 RNU7-43P-201ENST00000516554 64 ntBASIC3.16□□□□□ -1.9
CLCN1P35523 MIR4325-201ENST00000583049 90 ntBASIC3.16□□□□□ -1.9
CLCN1P35523 MIR8055-201ENST00000610739 97 ntBASIC3.16□□□□□ -1.9
CLCN1P35523 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLCN1P35523 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CLCN1P35523 Y_RNA.190-201ENST00000363964 101 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 Y_RNA.354-201ENST00000365448 111 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 RNA5SP100-201ENST00000410903 110 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 RNA5SP59-201ENST00000410922 110 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 AC234781.5-201ENST00000508429 271 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 Y_RNA.685-201ENST00000516532 108 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 MIR376B-201ENST00000614515 100 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 AC008133.2-201ENST00000624540 351 ntBASIC3.15□□□□□ -1.91
CLCN1P35523 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN1P35523 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN1P35523 AL023284.1-201ENST00000403956 276 ntBASIC3.14□□□□□ -1.91
CLCN1P35523 AC109327.2-201ENST00000448339 378 ntBASIC3.14□□□□□ -1.91
CLCN1P35523 AC003982.1-202ENST00000469928 248 ntBASIC3.14□□□□□ -1.91
CLCN1P35523 EIF4BP1-201ENST00000554881 351 ntBASIC3.14□□□□□ -1.91
CLCN1P35523 MIR4439-201ENST00000583746 80 ntBASIC3.14□□□□□ -1.91
CLCN1P35523 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.14□□□□□ -1.91
CLCN1P35523 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN1P35523 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCN1P35523 SUMO1P4-201ENST00000429430 302 ntBASIC3.13□□□□□ -1.91
CLCN1P35523 RN7SKP132-201ENST00000516001 208 ntBASIC3.13□□□□□ -1.91
CLCN1P35523 SNORA31.17-201ENST00000516953 127 ntBASIC3.13□□□□□ -1.91
CLCN1P35523 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCN1P35523 MIR4764-201ENST00000580680 88 ntBASIC3.13□□□□□ -1.91
CLCN1P35523 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.13□□□□□ -1.91
CLCN1P35523 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.13□□□□□ -1.91
CLCN1P35523 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLCN1P35523 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCN1P35523 RNA5SP393-201ENST00000363423 117 ntBASIC3.12□□□□□ -1.91
CLCN1P35523 SNORD116-22-201ENST00000384430 92 ntBASIC3.12□□□□□ -1.91
CLCN1P35523 MIR206-201ENST00000384872 86 ntBASIC3.12□□□□□ -1.91
CLCN1P35523 MIR520C-201ENST00000385005 87 ntBASIC3.12□□□□□ -1.91
CLCN1P35523 RNU2-40P-201ENST00000410833 196 ntBASIC3.12□□□□□ -1.91
CLCN1P35523 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.12□□□□□ -1.91
CLCN1P35523 MIR8065-201ENST00000620577 100 ntBASIC3.12□□□□□ -1.91
CLCN1P35523 Z97988.1-201ENST00000637697 135 ntBASIC3.12□□□□□ -1.91
CLCN1P35523 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLCN1P35523 Y_RNA.73-201ENST00000362910 113 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 RNU6-242P-201ENST00000384359 107 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 RNU6-360P-201ENST00000390944 104 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 RNU6-402P-201ENST00000410678 103 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 RNA5SP450-201ENST00000411206 102 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 AC090844.1-201ENST00000422019 156 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 AC011753.1-201ENST00000451001 220 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 RPL39P39-201ENST00000455840 151 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 RNU6-917P-201ENST00000516294 104 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 RNU7-35P-201ENST00000517174 62 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 CYP3A52P-201ENST00000563326 91 ntBASIC3.11□□□□□ -1.91
CLCN1P35523 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.11□□□□□ -1.91
CLCN1P35523 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCN1P35523 MIR422A-201ENST00000362286 90 ntBASIC3.1□□□□□ -1.91
CLCN1P35523 RNU6-1123P-201ENST00000362347 106 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms