Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 Y_RNA.127-201ENST00000363386 109 ntBASIC1.82□□□□□ -2.12
CD40P25942 RNU4-16P-201ENST00000364737 141 ntBASIC1.82□□□□□ -2.12
CD40P25942 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CD40P25942 AC008267.6-201ENST00000441664 139 ntBASIC1.82□□□□□ -2.12
CD40P25942 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.82□□□□□ -2.12
CD40P25942 RNU7-41P-201ENST00000515917 61 ntBASIC1.82□□□□□ -2.12
CD40P25942 AL357312.1-201ENST00000603879 298 ntBASIC1.82□□□□□ -2.12
CD40P25942 GHRLOS.1-201ENST00000610995 70 ntBASIC1.82□□□□□ -2.12
CD40P25942 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CD40P25942 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CD40P25942 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CD40P25942 Y_RNA.261-201ENST00000364631 102 ntBASIC1.81□□□□□ -2.12
CD40P25942 Y_RNA.366-201ENST00000365540 102 ntBASIC1.81□□□□□ -2.12
CD40P25942 Y_RNA.525-201ENST00000384570 113 ntBASIC1.81□□□□□ -2.12
CD40P25942 RNU7-45P-201ENST00000459460 63 ntBASIC1.81□□□□□ -2.12
CD40P25942 AC008834.1-201ENST00000511612 175 ntBASIC1.81□□□□□ -2.12
CD40P25942 SNORA31.4-201ENST00000516049 129 ntBASIC1.81□□□□□ -2.12
CD40P25942 RNU6-947P-201ENST00000516264 106 ntBASIC1.81□□□□□ -2.12
CD40P25942 RNU6-1061P-201ENST00000516530 99 ntBASIC1.81□□□□□ -2.12
CD40P25942 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.81□□□□□ -2.12
CD40P25942 AC133485.4-201ENST00000561835 220 ntBASIC1.81□□□□□ -2.12
CD40P25942 AC138907.4-201ENST00000570107 226 ntBASIC1.81□□□□□ -2.12
CD40P25942 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CD40P25942 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CD40P25942 MIR504-201ENST00000385065 83 ntBASIC1.8□□□□□ -2.12
CD40P25942 RNU6-913P-201ENST00000390913 95 ntBASIC1.8□□□□□ -2.12
CD40P25942 RNU6-1154P-201ENST00000391001 104 ntBASIC1.8□□□□□ -2.12
CD40P25942 RNU6-772P-201ENST00000516042 105 ntBASIC1.8□□□□□ -2.12
CD40P25942 RNU6-313P-201ENST00000516317 112 ntBASIC1.8□□□□□ -2.12
CD40P25942 AL096861.1-201ENST00000610899 123 ntBASIC1.8□□□□□ -2.12
CD40P25942 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CD40P25942 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CD40P25942 SNORD33-201ENST00000362761 85 ntBASIC1.79□□□□□ -2.12
CD40P25942 RNU6-1065P-201ENST00000384513 106 ntBASIC1.79□□□□□ -2.12
CD40P25942 RNU6-1168P-201ENST00000390831 104 ntBASIC1.79□□□□□ -2.12
CD40P25942 MIR548I2-201ENST00000408348 149 ntBASIC1.79□□□□□ -2.12
CD40P25942 RNU2-51P-201ENST00000410708 197 ntBASIC1.79□□□□□ -2.12
CD40P25942 AC027119.1-201ENST00000440877 241 ntBASIC1.79□□□□□ -2.12
CD40P25942 RNU7-73P-201ENST00000458743 63 ntBASIC1.79□□□□□ -2.12
CD40P25942 RN7SKP19-201ENST00000516016 252 ntBASIC1.79□□□□□ -2.12
CD40P25942 RNU6-479P-201ENST00000516348 105 ntBASIC1.79□□□□□ -2.12
CD40P25942 IGKV1-22-201ENST00000524313 326 ntBASIC1.79□□□□□ -2.12
CD40P25942 MIR3192-201ENST00000584920 77 ntBASIC1.79□□□□□ -2.12
CD40P25942 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CD40P25942 AL137067.1-201ENST00000615933 120 ntBASIC1.79□□□□□ -2.12
CD40P25942 MIR4251-201ENST00000635819 61 ntBASIC1.79□□□□□ -2.12
CD40P25942 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CD40P25942 SNORA22C-201ENST00000384614 134 ntBASIC1.78□□□□□ -2.12
CD40P25942 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.78□□□□□ -2.12
CD40P25942 RNU6-1190P-201ENST00000410811 104 ntBASIC1.78□□□□□ -2.12
CD40P25942 RNU6-781P-201ENST00000516377 101 ntBASIC1.78□□□□□ -2.12
CD40P25942 RNU6-659P-201ENST00000516454 104 ntBASIC1.78□□□□□ -2.12
CD40P25942 MIR3124-201ENST00000582636 67 ntBASIC1.78□□□□□ -2.12
CD40P25942 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
CD40P25942 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
CD40P25942 RNU6-1081P-201ENST00000384537 107 ntBASIC1.77□□□□□ -2.13
CD40P25942 MIR1289-2-201ENST00000408360 111 ntBASIC1.77□□□□□ -2.13
CD40P25942 Y_RNA.617-201ENST00000410920 90 ntBASIC1.77□□□□□ -2.13
CD40P25942 snoU13.16-201ENST00000459350 104 ntBASIC1.77□□□□□ -2.13
CD40P25942 AC104435.1-201ENST00000483483 166 ntBASIC1.77□□□□□ -2.13
CD40P25942 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.77□□□□□ -2.13
CD40P25942 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
CD40P25942 AC021443.1-201ENST00000604478 211 ntBASIC1.77□□□□□ -2.13
CD40P25942 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
CD40P25942 MIR7843-201ENST00000622274 79 ntBASIC1.77□□□□□ -2.13
CD40P25942 AC021613.1-201ENST00000623880 111 ntBASIC1.77□□□□□ -2.13
CD40P25942 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.77□□□□□ -2.13
CD40P25942 Y_RNA.291-201ENST00000364886 113 ntBASIC1.76□□□□□ -2.13
CD40P25942 SNORD58C-201ENST00000365223 64 ntBASIC1.76□□□□□ -2.13
CD40P25942 RPL39P39-201ENST00000455840 151 ntBASIC1.76□□□□□ -2.13
CD40P25942 RN7SKP179-201ENST00000516126 217 ntBASIC1.76□□□□□ -2.13
CD40P25942 AL020996.3-201ENST00000606617 222 ntBASIC1.76□□□□□ -2.13
CD40P25942 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CD40P25942 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CD40P25942 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
CD40P25942 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CD40P25942 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CD40P25942 RNA5SP48-201ENST00000363969 126 ntBASIC1.75□□□□□ -2.13
CD40P25942 RNU1-78P-201ENST00000391248 165 ntBASIC1.75□□□□□ -2.13
CD40P25942 MIR1263-201ENST00000408324 86 ntBASIC1.75□□□□□ -2.13
CD40P25942 HMGN1P33-201ENST00000432945 451 ntBASIC1.75□□□□□ -2.13
CD40P25942 DNAJC19P9-201ENST00000555084 351 ntBASIC1.75□□□□□ -2.13
CD40P25942 MIR548AI-201ENST00000579940 88 ntBASIC1.75□□□□□ -2.13
CD40P25942 MIR548AO-201ENST00000579992 96 ntBASIC1.75□□□□□ -2.13
CD40P25942 MIR4422-201ENST00000581938 83 ntBASIC1.75□□□□□ -2.13
CD40P25942 MIR5002-201ENST00000584713 97 ntBASIC1.75□□□□□ -2.13
CD40P25942 ZNF355P-201ENST00000427301 3216 ntBASIC1.75□□□□□ -2.13
CD40P25942 AC019129.1-201ENST00000403786 261 ntBASIC1.74□□□□□ -2.13
CD40P25942 RNU2-40P-201ENST00000410833 196 ntBASIC1.74□□□□□ -2.13
CD40P25942 Y_RNA.630-201ENST00000411370 108 ntBASIC1.74□□□□□ -2.13
CD40P25942 RPS27P16-201ENST00000425758 201 ntBASIC1.74□□□□□ -2.13
CD40P25942 AC009474.2-201ENST00000451383 136 ntBASIC1.74□□□□□ -2.13
CD40P25942 RPL30P7-201ENST00000479312 323 ntBASIC1.74□□□□□ -2.13
CD40P25942 AL512310.8-201ENST00000550183 120 ntBASIC1.74□□□□□ -2.13
CD40P25942 MIR3664-201ENST00000579074 99 ntBASIC1.74□□□□□ -2.13
CD40P25942 MIR4305-201ENST00000583252 102 ntBASIC1.74□□□□□ -2.13
CD40P25942 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CD40P25942 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CD40P25942 RNA5SP37-201ENST00000365420 130 ntBASIC1.73□□□□□ -2.13
CD40P25942 RNU6-1319P-201ENST00000390855 104 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms