Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC018710.1-201ENST00000506509 158 ntBASIC-1.45□□□□□ -2.64
APOBP04114 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.45□□□□□ -2.64
APOBP04114 RNU4-58P-201ENST00000363192 141 ntBASIC-1.45□□□□□ -2.64
APOBP04114 RNY4P10-201ENST00000365571 96 ntBASIC-1.45□□□□□ -2.64
APOBP04114 MTCO2P27-201ENST00000420740 428 ntBASIC-1.45□□□□□ -2.64
APOBP04114 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.45□□□□□ -2.64
APOBP04114 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.45□□□□□ -2.64
APOBP04114 RNU6-831P-201ENST00000384548 107 ntBASIC-1.46□□□□□ -2.64
APOBP04114 MIR509-1-201ENST00000385265 94 ntBASIC-1.46□□□□□ -2.64
APOBP04114 MIR509-2-201ENST00000390724 91 ntBASIC-1.46□□□□□ -2.64
APOBP04114 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.46□□□□□ -2.64
APOBP04114 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.46□□□□□ -2.64
APOBP04114 RNU6-827P-201ENST00000365553 106 ntBASIC-1.46□□□□□ -2.64
APOBP04114 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.46□□□□□ -2.64
APOBP04114 MIR519E-201ENST00000385075 84 ntBASIC-1.46□□□□□ -2.64
APOBP04114 SNORA40.5-201ENST00000391061 128 ntBASIC-1.46□□□□□ -2.64
APOBP04114 AC097484.2-201ENST00000509147 251 ntBASIC-1.46□□□□□ -2.64
APOBP04114 AC103591.3-201ENST00000608684 209 ntBASIC-1.46□□□□□ -2.64
APOBP04114 RNU6-519P-201ENST00000410590 108 ntBASIC-1.46□□□□□ -2.64
APOBP04114 AC012531.4-201ENST00000616509 177 ntBASIC-1.46□□□□□ -2.64
APOBP04114 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.47□□□□□ -2.64
APOBP04114 RNU6-387P-201ENST00000411331 105 ntBASIC-1.47□□□□□ -2.64
APOBP04114 AC069545.1-201ENST00000605671 358 ntBASIC-1.47□□□□□ -2.64
APOBP04114 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.47□□□□□ -2.64
APOBP04114 AL133215.3-201ENST00000609801 448 ntBASIC-1.47□□□□□ -2.64
APOBP04114 RNU6-268P-201ENST00000364174 107 ntBASIC-1.47□□□□□ -2.64
APOBP04114 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.47□□□□□ -2.64
APOBP04114 RNU6-531P-201ENST00000516694 104 ntBASIC-1.47□□□□□ -2.64
APOBP04114 AC008507.2-201ENST00000588402 1176 ntBASIC-1.47□□□□□ -2.64
APOBP04114 RNU6-337P-201ENST00000391243 106 ntBASIC-1.47□□□□□ -2.65
APOBP04114 RNU2-42P-201ENST00000410697 113 ntBASIC-1.47□□□□□ -2.65
APOBP04114 BX295541.1-201ENST00000417774 250 ntBASIC-1.47□□□□□ -2.65
APOBP04114 RNU7-51P-201ENST00000516560 62 ntBASIC-1.47□□□□□ -2.65
APOBP04114 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.47□□□□□ -2.65
APOBP04114 AC027807.2-201ENST00000616099 408 ntBASIC-1.47□□□□□ -2.65
APOBP04114 AC079248.2-201ENST00000623779 326 ntBASIC-1.47□□□□□ -2.65
APOBP04114 SNORD56.4-201ENST00000363883 71 ntBASIC-1.48□□□□□ -2.65
APOBP04114 MIR513C-201ENST00000401352 84 ntBASIC-1.48□□□□□ -2.65
APOBP04114 RNU6-325P-201ENST00000411132 105 ntBASIC-1.48□□□□□ -2.65
APOBP04114 MTND2P20-201ENST00000440805 661 ntBASIC-1.48□□□□□ -2.65
APOBP04114 RNU7-138P-201ENST00000459479 64 ntBASIC-1.48□□□□□ -2.65
APOBP04114 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.48□□□□□ -2.65
APOBP04114 MIR3941-201ENST00000582572 103 ntBASIC-1.48□□□□□ -2.65
APOBP04114 RNU6-685P-201ENST00000517088 95 ntBASIC-1.48□□□□□ -2.65
APOBP04114 SNORD51.1-201ENST00000365405 77 ntBASIC-1.49□□□□□ -2.65
APOBP04114 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.49□□□□□ -2.65
APOBP04114 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.49□□□□□ -2.65
APOBP04114 RNU6-541P-201ENST00000384709 110 ntBASIC-1.49□□□□□ -2.65
APOBP04114 RNU7-116P-201ENST00000516940 62 ntBASIC-1.49□□□□□ -2.65
APOBP04114 AC120024.2-201ENST00000576526 175 ntBASIC-1.49□□□□□ -2.65
APOBP04114 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.49□□□□□ -2.65
APOBP04114 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.49□□□□□ -2.65
APOBP04114 RNU4-75P-201ENST00000364621 146 ntBASIC-1.49□□□□□ -2.65
APOBP04114 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.49□□□□□ -2.65
APOBP04114 SNORA51.5-201ENST00000384126 131 ntBASIC-1.49□□□□□ -2.65
APOBP04114 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.49□□□□□ -2.65
APOBP04114 RNU6-1005P-201ENST00000384519 107 ntBASIC-1.49□□□□□ -2.65
APOBP04114 MTCO2P16-201ENST00000436962 677 ntBASIC-1.49□□□□□ -2.65
APOBP04114 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.49□□□□□ -2.65
APOBP04114 MTCO3P39-201ENST00000514812 518 ntBASIC-1.49□□□□□ -2.65
APOBP04114 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.49□□□□□ -2.65
APOBP04114 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.49□□□□□ -2.65
APOBP04114 AC019226.2-201ENST00000625973 424 ntBASIC-1.49□□□□□ -2.65
APOBP04114 AL117351.1-201ENST00000438864 766 ntBASIC-1.49□□□□□ -2.65
APOBP04114 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-1.49□□□□□ -2.65
APOBP04114 AC007012.1-201ENST00000567192 175 ntBASIC-1.49□□□□□ -2.65
APOBP04114 AC022418.1-201ENST00000624118 445 ntBASIC-1.49□□□□□ -2.65
APOBP04114 MIR5683-201ENST00000636514 76 ntBASIC-1.49□□□□□ -2.65
APOBP04114 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.5□□□□□ -2.65
APOBP04114 RNU6-101P-201ENST00000410323 104 ntBASIC-1.5□□□□□ -2.65
APOBP04114 AC137499.1-201ENST00000427602 88 ntBASIC-1.5□□□□□ -2.65
APOBP04114 PIGPP4-201ENST00000584447 307 ntBASIC-1.5□□□□□ -2.65
APOBP04114 U4.1-201ENST00000620349 87 ntBASIC-1.5□□□□□ -2.65
APOBP04114 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.5□□□□□ -2.65
APOBP04114 snoU13.6-201ENST00000458785 104 ntBASIC-1.5□□□□□ -2.65
APOBP04114 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.5□□□□□ -2.65
APOBP04114 MIR548AE1-201ENST00000583292 70 ntBASIC-1.5□□□□□ -2.65
APOBP04114 RNU4-70P-201ENST00000384579 139 ntBASIC-1.5□□□□□ -2.65
APOBP04114 U6.109-201ENST00000636749 87 ntBASIC-1.5□□□□□ -2.65
APOBP04114 MIR320C1-201ENST00000408566 88 ntBASIC-1.5□□□□□ -2.65
APOBP04114 MTCO1P27-201ENST00000448269 226 ntBASIC-1.5□□□□□ -2.65
APOBP04114 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
APOBP04114 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.51□□□□□ -2.65
APOBP04114 MTND1P35-201ENST00000526739 508 ntBASIC-1.51□□□□□ -2.65
APOBP04114 AC124312.5-201ENST00000604451 268 ntBASIC-1.51□□□□□ -2.65
APOBP04114 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.51□□□□□ -2.65
APOBP04114 SNORA27-201ENST00000384323 126 ntBASIC-1.51□□□□□ -2.65
APOBP04114 AC005771.1-201ENST00000585581 349 ntBASIC-1.51□□□□□ -2.65
APOBP04114 AC009159.2-201ENST00000617603 606 ntBASIC-1.51□□□□□ -2.65
APOBP04114 AL391262.2-201ENST00000622466 494 ntBASIC-1.51□□□□□ -2.65
APOBP04114 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.52□□□□□ -2.65
APOBP04114 RNU6-353P-201ENST00000364266 108 ntBASIC-1.52□□□□□ -2.65
APOBP04114 AF228730.4-201ENST00000421457 183 ntBASIC-1.52□□□□□ -2.65
APOBP04114 RNU6-612P-201ENST00000516909 102 ntBASIC-1.52□□□□□ -2.65
APOBP04114 AC090617.8-201ENST00000623339 167 ntBASIC-1.52□□□□□ -2.65
APOBP04114 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.52□□□□□ -2.65
APOBP04114 MIR6717-201ENST00000622747 73 ntBASIC-1.52□□□□□ -2.65
APOBP04114 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.52□□□□□ -2.65
APOBP04114 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.52□□□□□ -2.65
APOBP04114 JPX_2.1-201ENST00000614161 69 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 255.1 ms