Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-90P-201ENST00000606352 106 ntBASIC3.24□□□□□ -1.89
ALDH1A1P00352 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.24□□□□□ -1.89
ALDH1A1P00352 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.24□□□□□ -1.89
ALDH1A1P00352 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
ALDH1A1P00352 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALDH1A1P00352 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.23□□□□□ -1.89
ALDH1A1P00352 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ALDH1A1P00352 Y_RNA.173-201ENST00000363776 113 ntBASIC3.23□□□□□ -1.89
ALDH1A1P00352 RNU6-478P-201ENST00000363904 110 ntBASIC3.23□□□□□ -1.89
ALDH1A1P00352 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ALDH1A1P00352 MIR1262-201ENST00000408276 93 ntBASIC3.23□□□□□ -1.89
ALDH1A1P00352 RNA5SP217-201ENST00000515959 91 ntBASIC3.23□□□□□ -1.89
ALDH1A1P00352 RNU7-35P-201ENST00000517174 62 ntBASIC3.23□□□□□ -1.89
ALDH1A1P00352 Y_RNA.788-201ENST00000622394 112 ntBASIC3.23□□□□□ -1.89
ALDH1A1P00352 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ALDH1A1P00352 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ALDH1A1P00352 RNA5SP493-201ENST00000364115 91 ntBASIC3.22□□□□□ -1.89
ALDH1A1P00352 SNORA25B-201ENST00000365507 128 ntBASIC3.22□□□□□ -1.89
ALDH1A1P00352 RNU6-342P-201ENST00000384521 104 ntBASIC3.22□□□□□ -1.89
ALDH1A1P00352 U8.16-201ENST00000391279 133 ntBASIC3.22□□□□□ -1.89
ALDH1A1P00352 HMGN1P18-201ENST00000457642 277 ntBASIC3.22□□□□□ -1.89
ALDH1A1P00352 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
ALDH1A1P00352 MIR7153-201ENST00000637758 57 ntBASIC3.22□□□□□ -1.89
ALDH1A1P00352 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
ALDH1A1P00352 Y_RNA.57-201ENST00000362806 113 ntBASIC3.21□□□□□ -1.9
ALDH1A1P00352 SNORA26.7-201ENST00000391288 122 ntBASIC3.21□□□□□ -1.9
ALDH1A1P00352 SEM1P1-201ENST00000506694 209 ntBASIC3.21□□□□□ -1.9
ALDH1A1P00352 RNU7-153P-201ENST00000516455 62 ntBASIC3.21□□□□□ -1.9
ALDH1A1P00352 DEFB122-202ENST00000569013 197 ntBASIC3.21□□□□□ -1.9
ALDH1A1P00352 MIR3169-201ENST00000578032 83 ntBASIC3.21□□□□□ -1.9
ALDH1A1P00352 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.21□□□□□ -1.9
ALDH1A1P00352 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.21□□□□□ -1.9
ALDH1A1P00352 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ALDH1A1P00352 Y_RNA.448-201ENST00000384185 108 ntBASIC3.2□□□□□ -1.9
ALDH1A1P00352 SNORA25.13-201ENST00000516395 103 ntBASIC3.2□□□□□ -1.9
ALDH1A1P00352 RNU6-539P-201ENST00000516665 103 ntBASIC3.2□□□□□ -1.9
ALDH1A1P00352 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
ALDH1A1P00352 AC022513.1-201ENST00000624512 117 ntBASIC3.2□□□□□ -1.9
ALDH1A1P00352 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.2□□□□□ -1.9
ALDH1A1P00352 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
ALDH1A1P00352 RNU6-1094P-201ENST00000362416 104 ntBASIC3.19□□□□□ -1.9
ALDH1A1P00352 MIR181B2-201ENST00000385004 89 ntBASIC3.19□□□□□ -1.9
ALDH1A1P00352 MIR516B2-201ENST00000385190 85 ntBASIC3.19□□□□□ -1.9
ALDH1A1P00352 SPINT5P-201ENST00000448174 155 ntBASIC3.19□□□□□ -1.9
ALDH1A1P00352 RPS27P29-201ENST00000463110 252 ntBASIC3.19□□□□□ -1.9
ALDH1A1P00352 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.19□□□□□ -1.9
ALDH1A1P00352 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ALDH1A1P00352 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALDH1A1P00352 RNU6-624P-201ENST00000363411 107 ntBASIC3.18□□□□□ -1.9
ALDH1A1P00352 RNU6-865P-201ENST00000364772 107 ntBASIC3.18□□□□□ -1.9
ALDH1A1P00352 RNA5SP425-201ENST00000410336 112 ntBASIC3.18□□□□□ -1.9
ALDH1A1P00352 AC087499.7-201ENST00000441958 109 ntBASIC3.18□□□□□ -1.9
ALDH1A1P00352 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.18□□□□□ -1.9
ALDH1A1P00352 AC243994.1-201ENST00000618627 109 ntBASIC3.18□□□□□ -1.9
ALDH1A1P00352 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.18□□□□□ -1.9
ALDH1A1P00352 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALDH1A1P00352 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALDH1A1P00352 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
ALDH1A1P00352 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
ALDH1A1P00352 RNU6-1321P-201ENST00000390905 107 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 HMGN1P33-201ENST00000432945 451 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 HSPE1P9-201ENST00000440046 311 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 AC245047.7-201ENST00000440265 293 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 RNU6-917P-201ENST00000516294 104 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 SNORD67.1-201ENST00000516618 108 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 RNA5SP168-201ENST00000516642 112 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 FAM106DP-201ENST00000586416 501 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 AC012676.2-201ENST00000619258 186 ntBASIC3.17□□□□□ -1.9
ALDH1A1P00352 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.17□□□□□ -1.9
ALDH1A1P00352 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.17□□□□□ -1.9
ALDH1A1P00352 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ALDH1A1P00352 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.17□□□□□ -1.9
ALDH1A1P00352 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.16□□□□□ -1.9
ALDH1A1P00352 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALDH1A1P00352 SNORD28B-201ENST00000390993 75 ntBASIC3.16□□□□□ -1.9
ALDH1A1P00352 RNU6-482P-201ENST00000391068 107 ntBASIC3.16□□□□□ -1.9
ALDH1A1P00352 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.16□□□□□ -1.9
ALDH1A1P00352 RNU6-519P-201ENST00000410590 108 ntBASIC3.16□□□□□ -1.9
ALDH1A1P00352 AL450471.1-201ENST00000447509 127 ntBASIC3.16□□□□□ -1.9
ALDH1A1P00352 RN7SL633P-201ENST00000488974 297 ntBASIC3.16□□□□□ -1.9
ALDH1A1P00352 AC015712.3-201ENST00000559380 164 ntBASIC3.16□□□□□ -1.9
ALDH1A1P00352 MIR548AR-201ENST00000582191 57 ntBASIC3.16□□□□□ -1.9
ALDH1A1P00352 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
ALDH1A1P00352 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
ALDH1A1P00352 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
ALDH1A1P00352 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
ALDH1A1P00352 RNU6-805P-201ENST00000365643 106 ntBASIC3.15□□□□□ -1.91
ALDH1A1P00352 RNU6-480P-201ENST00000384332 107 ntBASIC3.15□□□□□ -1.91
ALDH1A1P00352 MIR452-201ENST00000385020 85 ntBASIC3.15□□□□□ -1.91
ALDH1A1P00352 MIR136-201ENST00000385207 82 ntBASIC3.15□□□□□ -1.91
ALDH1A1P00352 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ALDH1A1P00352 RNU6-220P-201ENST00000390919 107 ntBASIC3.15□□□□□ -1.91
ALDH1A1P00352 MIR1236-201ENST00000408340 102 ntBASIC3.15□□□□□ -1.91
ALDH1A1P00352 SNORA11.4-201ENST00000408823 129 ntBASIC3.15□□□□□ -1.91
ALDH1A1P00352 MIR4648-201ENST00000580107 72 ntBASIC3.15□□□□□ -1.91
ALDH1A1P00352 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
ALDH1A1P00352 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.14□□□□□ -1.91
ALDH1A1P00352 RNA5SP138-201ENST00000365098 114 ntBASIC3.14□□□□□ -1.91
ALDH1A1P00352 SNORA2B-201ENST00000384583 137 ntBASIC3.14□□□□□ -1.91
ALDH1A1P00352 AL034345.1-201ENST00000407768 123 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms