Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RNU6-1022P-201ENST00000365049 104 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.426-201ENST00000384068 113 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORA27-201ENST00000384323 126 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-616P-201ENST00000384353 107 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC087499.4-201ENST00000448505 178 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORA31.4-201ENST00000516049 129 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 MIR5739-201ENST00000619803 80 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC021613.1-201ENST00000623880 111 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.4-201ENST00000362333 112 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.494-201ENST00000384432 111 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AL627390.1-201ENST00000396055 340 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORA11.4-201ENST00000408823 129 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.620-201ENST00000411009 88 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SCARNA3-201ENST00000517097 143 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-1116P-201ENST00000517269 99 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 MIR4762-201ENST00000585261 75 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 MIR4662A-201ENST00000637499 67 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AL512310.12-203ENST00000640543 90 ntBASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.96-201ENST00000363092 109 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.336-201ENST00000365307 109 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-1201P-201ENST00000384227 107 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORD38C-201ENST00000384381 69 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU4-69P-201ENST00000410677 143 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU7-113P-201ENST00000459273 62 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNA5SP200-201ENST00000516360 103 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC019288.1-201ENST00000557918 224 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC104984.5-201ENST00000586878 94 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC092881.1-201ENST00000638218 2733 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORD114-6-201ENST00000364393 72 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 U8.5-201ENST00000364528 136 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 POLR2J4-204ENST00000418424 324 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 snoU13.26-201ENST00000459452 105 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU7-94P-201ENST00000459576 63 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC139453.2-201ENST00000487255 133 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC114811.1-201ENST00000507207 168 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-1258P-201ENST00000516911 111 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC090821.2-201ENST00000523552 176 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORD77B-201ENST00000391112 67 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU2-48P-201ENST00000410694 191 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AL606517.2-201ENST00000442855 241 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 ATP5J2P3-201ENST00000451550 258 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-998P-201ENST00000515894 101 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNA5SP33-201ENST00000516687 98 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-667P-201ENST00000517186 102 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU7-181P-201ENST00000517234 74 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR6715A-201ENST00000615929 79 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR548BB-201ENST00000626714 66 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC006160.2-201ENST00000637708 154 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AP000648.3-201ENST00000623539 4507 ntBASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-862P-201ENST00000362804 105 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORA32-201ENST00000384072 121 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 Y_RNA.470-201ENST00000384307 117 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU6-163P-201ENST00000384396 106 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 U8.15-201ENST00000390947 134 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU2-40P-201ENST00000410833 196 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC069257.2-201ENST00000441819 155 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 CYP2C59P-201ENST00000457790 269 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 UBL5P3-201ENST00000475112 231 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNA5SP402-201ENST00000517148 110 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC121758.2-201ENST00000553271 193 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR548AE2-201ENST00000583456 67 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC096720.1-201ENST00000604441 183 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AL355297.2-201ENST00000604792 129 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MIR376B-201ENST00000614515 100 ntBASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.2□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 Y_RNA.299-201ENST00000364973 94 ntBASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 Y_RNA.377-201ENST00000365644 108 ntBASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 SNORA6-201ENST00000384033 151 ntBASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 AC245047.3-201ENST00000429428 127 ntBASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 STAG3L5P-204ENST00000443759 179 ntBASIC2.19□□□□□ -2.06
C1QTNF3-AMACRE9PGA6 RNU7-96P-201ENST00000459535 64 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms