Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MIR337-201ENST00000362281 93 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 SNORD33-201ENST00000362761 85 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 RNU6-508P-201ENST00000363231 103 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 RNU6-1065P-201ENST00000384513 106 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 RNU6-257P-201ENST00000410238 98 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 RNU7-80P-201ENST00000459562 61 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 RPS29P24-201ENST00000486345 171 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 RNU7-43P-201ENST00000516554 64 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 MIR4422-201ENST00000581938 83 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 MIR4791-201ENST00000607666 84 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 GHRLOS.1-201ENST00000610995 70 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 AC243994.1-201ENST00000618627 109 ntBASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC163A0A0D9SF12 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
CCDC163A0A0D9SF12 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC163A0A0D9SF12 RNU1-133P-201ENST00000364867 167 ntBASIC1.95□□□□□ -2.1
CCDC163A0A0D9SF12 SNORA51.10-201ENST00000384418 136 ntBASIC1.95□□□□□ -2.1
CCDC163A0A0D9SF12 SNORD41-201ENST00000386967 70 ntBASIC1.95□□□□□ -2.1
CCDC163A0A0D9SF12 RNU6-1211P-201ENST00000459179 105 ntBASIC1.95□□□□□ -2.1
CCDC163A0A0D9SF12 SNORD111.1-201ENST00000516421 86 ntBASIC1.95□□□□□ -2.1
CCDC163A0A0D9SF12 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC163A0A0D9SF12 MIRLET7G-201ENST00000362280 84 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 Y_RNA.120-201ENST00000363304 110 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 RNU6-309P-201ENST00000364573 106 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 SNORA67.5-201ENST00000391036 107 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 SNORA17.3-201ENST00000391159 129 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 MTND4LP9-201ENST00000427694 174 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 AL035398.1-201ENST00000430869 322 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 RNU2-11P-201ENST00000459191 187 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 Y_RNA.692-201ENST00000516627 105 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 SCARNA15-202ENST00000516881 127 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 AL357312.1-201ENST00000603879 298 ntBASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC163A0A0D9SF12 ZNF720P1-201ENST00000562403 1939 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 MIR302D-201ENST00000362275 68 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 RNY1P10-201ENST00000363268 113 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 Y_RNA.294-201ENST00000364916 102 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 RNA5SP190-201ENST00000365222 118 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 SNORA70.7-201ENST00000384159 133 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 Y_RNA.454-201ENST00000384224 113 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 RPL39P39-201ENST00000455840 151 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 RPS29P29-201ENST00000456396 171 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 RNU7-41P-201ENST00000515917 61 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 AC008133.2-201ENST00000624540 351 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 AL442644.1-201ENST00000454390 3105 ntBASIC1.93□□□□□ -2.1
CCDC163A0A0D9SF12 RNU6-321P-201ENST00000410912 106 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 TMSB4XP3-201ENST00000445144 114 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 AL392103.1-201ENST00000447000 198 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 RNU7-96P-201ENST00000459535 64 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 RNU2-60P-201ENST00000517290 128 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 AL022345.2-201ENST00000606307 135 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 AC091932.4-201ENST00000623386 200 ntBASIC1.92□□□□□ -2.1
CCDC163A0A0D9SF12 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 Y_RNA.537-201ENST00000384626 109 ntBASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 RNU1-78P-201ENST00000391248 165 ntBASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 AC027119.1-201ENST00000440877 241 ntBASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 RNU6-998P-201ENST00000515894 101 ntBASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 RNU6-970P-201ENST00000516312 107 ntBASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 Y_RNA.757-201ENST00000578934 114 ntBASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 TUG1_4.1-201ENST00000619464 181 ntBASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 AP001340.1-201ENST00000624405 217 ntBASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC163A0A0D9SF12 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC163A0A0D9SF12 SNORD50.2-201ENST00000365465 70 ntBASIC1.9□□□□□ -2.11
CCDC163A0A0D9SF12 Y_RNA.586-201ENST00000391146 98 ntBASIC1.9□□□□□ -2.11
CCDC163A0A0D9SF12 BTF3P4-201ENST00000418852 495 ntBASIC1.9□□□□□ -2.11
CCDC163A0A0D9SF12 MIR3910-1-201ENST00000580936 111 ntBASIC1.9□□□□□ -2.11
CCDC163A0A0D9SF12 MIR4251-201ENST00000635819 61 ntBASIC1.9□□□□□ -2.11
CCDC163A0A0D9SF12 AL603914.1-201ENST00000401964 204 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 RNU7-45P-201ENST00000459460 63 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 AC104435.1-201ENST00000483483 166 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 RNU7-53P-201ENST00000516705 60 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 RNU6-971P-201ENST00000516920 106 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 MIR3192-201ENST00000584920 77 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 HSPE1P19-201ENST00000603327 295 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 AL096861.1-201ENST00000610899 123 ntBASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC163A0A0D9SF12 SNORA25.3-201ENST00000363205 127 ntBASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 RNU4-16P-201ENST00000364737 141 ntBASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 SNORD13-201ENST00000459299 104 ntBASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 RNA5SP236-201ENST00000516169 116 ntBASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 AL512310.8-201ENST00000550183 120 ntBASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 AL359821.1-201ENST00000605519 182 ntBASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 U7.2-201ENST00000607576 63 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms