Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNA5SP51-201ENST00000364750 119 ntBASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 RNY1P2-201ENST00000364820 117 ntBASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 SNRPGP12-201ENST00000449481 213 ntBASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA4Q9Y5G9 MIR520H-201ENST00000385126 88 ntBASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 RNA5SP292-201ENST00000390974 118 ntBASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 Y_RNA.596-201ENST00000410462 109 ntBASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 SNORA18.5-201ENST00000516616 101 ntBASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 RNU6-303P-201ENST00000517091 106 ntBASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 MIR5094-201ENST00000578766 85 ntBASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 AC090897.1-201ENST00000580909 226 ntBASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHGA4Q9Y5G9 SNORA38-201ENST00000363946 132 ntBASIC3.56□□□□□ -1.84
PCDHGA4Q9Y5G9 RNU1-109P-201ENST00000383960 147 ntBASIC3.56□□□□□ -1.84
PCDHGA4Q9Y5G9 RN7SKP123-201ENST00000410732 291 ntBASIC3.56□□□□□ -1.84
PCDHGA4Q9Y5G9 SNORA31.26-201ENST00000517250 137 ntBASIC3.56□□□□□ -1.84
PCDHGA4Q9Y5G9 MIR4536-1-201ENST00000583537 88 ntBASIC3.56□□□□□ -1.84
PCDHGA4Q9Y5G9 MIR4506-201ENST00000584693 77 ntBASIC3.56□□□□□ -1.84
PCDHGA4Q9Y5G9 MIR664A-201ENST00000626086 82 ntBASIC3.56□□□□□ -1.84
PCDHGA4Q9Y5G9 MIR3651-201ENST00000630427 90 ntBASIC3.56□□□□□ -1.84
PCDHGA4Q9Y5G9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PCDHGA4Q9Y5G9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA4Q9Y5G9 SNORA72.6-201ENST00000384520 129 ntBASIC3.55□□□□□ -1.84
PCDHGA4Q9Y5G9 RN7SL601P-201ENST00000471221 293 ntBASIC3.55□□□□□ -1.84
PCDHGA4Q9Y5G9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PCDHGA4Q9Y5G9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHGA4Q9Y5G9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 RNA5SP237-201ENST00000410414 113 ntBASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 AC074348.1-201ENST00000426503 132 ntBASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 SNORD105B-201ENST00000458770 79 ntBASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 RNU6-850P-201ENST00000516934 103 ntBASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 SNORA74.3-201ENST00000517108 154 ntBASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 AC141846.1-201ENST00000568348 142 ntBASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 AP000553.6-201ENST00000641242 118 ntBASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 AC092435.3-201ENST00000565538 3654 ntBASIC3.54□□□□□ -1.84
PCDHGA4Q9Y5G9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 RNU1-58P-201ENST00000362413 163 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 RNU6-208P-201ENST00000362431 107 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 SNORD115-3-201ENST00000363100 82 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 RNA5SP50-201ENST00000363731 107 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 MIR490-201ENST00000384865 128 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 AC093423.1-201ENST00000440817 142 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 AC023790.1-201ENST00000482174 347 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 RPS27P21-201ENST00000486977 252 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 AC026271.5-201ENST00000577873 130 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 MIR4298-201ENST00000584380 73 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 SCARNA15.3-201ENST00000626315 122 ntBASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA4Q9Y5G9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 MIR154-201ENST00000385243 84 ntBASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 RNU6-663P-201ENST00000391105 106 ntBASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 AC027119.1-201ENST00000440877 241 ntBASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 RN7SL594P-201ENST00000470590 287 ntBASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 MIR4500-201ENST00000579472 76 ntBASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 AL513423.1-201ENST00000621695 132 ntBASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA4Q9Y5G9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 RNU6-571P-201ENST00000384128 107 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 RNU6-1241P-201ENST00000384536 107 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 SNORD38B-201ENST00000384690 67 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 AC015818.7-201ENST00000428754 109 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 HSPE1P24-201ENST00000450782 238 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 RN7SKP83-201ENST00000516512 178 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 RNU7-43P-201ENST00000516554 64 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 SCARNA16.3-201ENST00000516595 184 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 AC104996.3-201ENST00000590718 94 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 AL357312.1-201ENST00000603879 298 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 AC008133.2-201ENST00000624540 351 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 SNORD38B-202ENST00000625943 69 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 AL021368.2-201ENST00000606125 5352 ntBASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA4Q9Y5G9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PCDHGA4Q9Y5G9 MIR148B-201ENST00000362252 99 ntBASIC3.5□□□□□ -1.85
PCDHGA4Q9Y5G9 MIR660-201ENST00000385235 97 ntBASIC3.5□□□□□ -1.85
PCDHGA4Q9Y5G9 CYCSP4-201ENST00000429682 331 ntBASIC3.5□□□□□ -1.85
PCDHGA4Q9Y5G9 AC067747.1-201ENST00000608026 250 ntBASIC3.5□□□□□ -1.85
PCDHGA4Q9Y5G9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA4Q9Y5G9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA4Q9Y5G9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA4Q9Y5G9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms