Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.497-201ENST00000384447 98 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 Y_RNA.547-201ENST00000384654 119 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 Y_RNA.568-201ENST00000384742 113 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 MIR548A2-201ENST00000384956 97 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 MIR518F-201ENST00000384973 87 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 MIR624-201ENST00000385217 97 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 MIR569-201ENST00000385228 96 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 JTBP1-201ENST00000441314 247 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 RNU7-25P-201ENST00000516544 62 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 MIR3129-201ENST00000581095 76 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 AL512598.1-201ENST00000610158 273 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 MIR8070-201ENST00000616510 88 ntBASIC1.81□□□□□ -2.12
SSX2IPQ9Y2D8 RNY1P10-201ENST00000363268 113 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 SNORD115-28-201ENST00000363931 81 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 SNORA25.9-201ENST00000365087 128 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 Y_RNA.410-201ENST00000383992 113 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 SNORA1-201ENST00000384107 130 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 MIR194-1-201ENST00000384892 85 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 AC004965.1-201ENST00000413033 213 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 AP1B1P2-201ENST00000416196 106 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 TMSB4XP3-201ENST00000445144 114 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 AC093850.1-201ENST00000454121 251 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 MIR4778-201ENST00000577635 80 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 SNORD53B-201ENST00000577887 78 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 AC015726.2-201ENST00000620112 122 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 AL442644.1-201ENST00000454390 3105 ntBASIC1.8□□□□□ -2.12
SSX2IPQ9Y2D8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-203P-201ENST00000384038 104 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-997P-201ENST00000384725 107 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 Y_RNA.584-201ENST00000391090 114 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 RNU4-62P-201ENST00000410125 130 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 AC087499.4-201ENST00000448505 178 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 RNU7-197P-201ENST00000458836 62 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 RNU1-98P-201ENST00000458992 160 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 MIR3910-1-201ENST00000580936 111 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 AC131055.1-201ENST00000584626 316 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SSX2IPQ9Y2D8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-1336P-201ENST00000383886 109 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 Y_RNA.466-201ENST00000384294 113 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 MIR136-201ENST00000385207 82 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 MIR1267-201ENST00000408723 78 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 AF228730.3-201ENST00000436691 102 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 AC092991.1-201ENST00000477176 376 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 TRMT112P2-201ENST00000512910 132 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 RNU6-426P-201ENST00000516464 97 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 ICE2P2-201ENST00000483823 2787 ntBASIC1.78□□□□□ -2.12
SSX2IPQ9Y2D8 Y_RNA.37-201ENST00000362606 108 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 RNU6-1189P-201ENST00000383958 107 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 RNU6-439P-201ENST00000384188 106 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 MIR518E-201ENST00000385252 88 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 SNORD77.3-201ENST00000391113 65 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 MIR8074-201ENST00000615081 81 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 AC010332.2-201ENST00000613083 1904 ntBASIC1.77□□□□□ -2.13
SSX2IPQ9Y2D8 SNORD18B-201ENST00000365659 72 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 MIR489-201ENST00000384923 84 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 MIR516B2-201ENST00000385190 85 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 MIR934-201ENST00000401241 83 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 AC008834.1-201ENST00000511612 175 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 RNU4-57P-201ENST00000515980 135 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 SUMO2P16-201ENST00000519475 264 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 MIR3198-2-201ENST00000577868 80 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 AP001340.1-201ENST00000624405 217 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 AC091895.1-201ENST00000624494 256 ntBASIC1.76□□□□□ -2.13
SSX2IPQ9Y2D8 Y_RNA.116-201ENST00000363292 103 ntBASIC1.75□□□□□ -2.13
SSX2IPQ9Y2D8 Y_RNA.420-201ENST00000384043 110 ntBASIC1.75□□□□□ -2.13
SSX2IPQ9Y2D8 SNORA40-201ENST00000388090 126 ntBASIC1.75□□□□□ -2.13
SSX2IPQ9Y2D8 RNU6-406P-201ENST00000516470 107 ntBASIC1.75□□□□□ -2.13
SSX2IPQ9Y2D8 MIR4303-201ENST00000581299 66 ntBASIC1.75□□□□□ -2.13
SSX2IPQ9Y2D8 AC095038.3-201ENST00000634439 195 ntBASIC1.75□□□□□ -2.13
SSX2IPQ9Y2D8 AC132825.6-201ENST00000638861 357 ntBASIC1.75□□□□□ -2.13
SSX2IPQ9Y2D8 Y_RNA.120-201ENST00000363304 110 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 SNORA1.2-201ENST00000365189 134 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 MIR526A1-201ENST00000384897 85 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 RNU6-460P-201ENST00000391158 108 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 U8.17-201ENST00000391292 132 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 MTATP6P21-201ENST00000440681 189 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 AP001328.1-201ENST00000528550 176 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 AP003484.1-201ENST00000530974 250 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 MIR5197-201ENST00000583721 112 ntBASIC1.74□□□□□ -2.13
SSX2IPQ9Y2D8 TUG1_4.1-201ENST00000619464 181 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms