Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 SNORA22.1-201ENST00000362701 134 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 RNU6-424P-201ENST00000384367 105 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 MIR1262-201ENST00000408276 93 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 MIR1267-201ENST00000408723 78 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC022018.1-201ENST00000430685 241 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC015922.2-201ENST00000435593 184 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC108729.3-201ENST00000513484 108 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 Z82195.2-201ENST00000612348 18351 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 RNU6-509P-201ENST00000363519 107 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 SNORA25B-201ENST00000365507 128 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 Y_RNA.430-201ENST00000384081 110 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 UBL5P3-201ENST00000475112 231 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR3670-2-201ENST00000582974 65 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR3670-1-201ENST00000584160 65 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR3670-3-201ENST00000584855 65 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR3670-4-201ENST00000612260 65 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR376B-201ENST00000614515 100 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 AC027279.3-201ENST00000625055 122 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 RNA5SP493-201ENST00000364115 91 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 MIR23A-201ENST00000385245 73 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 AL139132.1-201ENST00000431587 344 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 AL049873.1-201ENST00000480540 376 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 EIF4BP1-201ENST00000554881 351 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 MIR5194-201ENST00000582634 120 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 MIR8054-201ENST00000620877 86 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 Y_RNA.247-201ENST00000364500 92 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 RNU6-220P-201ENST00000390919 107 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 Y_RNA.607-201ENST00000410597 98 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 RN7SKP192-201ENST00000411291 327 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC090844.1-201ENST00000422019 156 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC003982.1-202ENST00000469928 248 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 SCARNA13-201ENST00000516672 275 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 MIR3152-201ENST00000579801 74 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC103810.7-201ENST00000607821 91 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC006386.2-201ENST00000624491 75 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC012005.1-201ENST00000624575 75 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AL137790.1-201ENST00000634283 177 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 SNORA26.6-201ENST00000391256 115 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 AC003685.2-201ENST00000422795 395 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 RNU7-34P-201ENST00000459394 64 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 MIR3169-201ENST00000578032 83 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 AL033523.1-201ENST00000605153 153 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 SNORA28-201ENST00000606769 126 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 AC007336.1-201ENST00000576365 3828 ntBASIC3.02□□□□□ -1.93
NUCKS1Q9H1E3 SNORA32-201ENST00000384072 121 ntBASIC3.02□□□□□ -1.93
NUCKS1Q9H1E3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.02□□□□□ -1.93
NUCKS1Q9H1E3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.02□□□□□ -1.93
NUCKS1Q9H1E3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-633P-201ENST00000362612 103 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.316-201ENST00000365118 111 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 COTL1P1-201ENST00000422309 375 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 UBL5P1-201ENST00000507979 193 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 SNORA31.10-201ENST00000516482 106 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-86P-201ENST00000606534 107 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 AC022513.1-201ENST00000624512 117 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.94-201ENST00000363068 106 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3□□□□□ -1.93
NUCKS1Q9H1E3 MIR889-201ENST00000401280 79 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-1190P-201ENST00000410811 104 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-1006P-201ENST00000516998 103 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-833P-201ENST00000363486 107 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 SNORA80A-201ENST00000363922 136 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-1163P-201ENST00000364516 107 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 SNORA1.2-201ENST00000365189 134 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 SNORA70.7-201ENST00000384159 133 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 MIR627-201ENST00000384979 97 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-788P-201ENST00000390967 104 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 U8.16-201ENST00000391279 133 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.609-201ENST00000410669 89 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RPS12P2-201ENST00000439728 269 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU7-53P-201ENST00000516705 60 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-958P-201ENST00000516995 106 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms