Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNTNAP3Q9BZ76 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNTNAP3Q9BZ76 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
CNTNAP3Q9BZ76 MFSD8-233ENST00000641482 4860 ntBASIC3.13□□□□□ -1.91
CNTNAP3Q9BZ76 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 AL356274.2-201ENST00000624379 3752 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 Y_RNA.338-201ENST00000365320 114 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 SNORA25B-201ENST00000365507 128 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 MIR1267-201ENST00000408723 78 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 RNU6-687P-201ENST00000516443 89 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 RNU6-448P-201ENST00000517052 107 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 AC046143.2-201ENST00000609789 160 ntBASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CNTNAP3Q9BZ76 SNORA63.2-201ENST00000362603 126 ntBASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 RNU6-519P-201ENST00000410590 108 ntBASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 AC006989.1-201ENST00000427212 131 ntBASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 AC104332.2-201ENST00000429959 156 ntBASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 RNU7-28P-201ENST00000516759 62 ntBASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 FAM106DP-201ENST00000586416 501 ntBASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 AC096644.4-201ENST00000563417 2912 ntBASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CNTNAP3Q9BZ76 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 RNA5SP133-201ENST00000363368 119 ntBASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 Y_RNA.532-201ENST00000384590 113 ntBASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 RNA5SP261-201ENST00000410536 106 ntBASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 RNU6-1190P-201ENST00000410811 104 ntBASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 CST2P1-201ENST00000425770 87 ntBASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 AL139132.1-201ENST00000431587 344 ntBASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
CNTNAP3Q9BZ76 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 MIRLET7C-201ENST00000362160 84 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 RNU6-424P-201ENST00000384367 105 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 AC015922.2-201ENST00000435593 184 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 SPINT5P-201ENST00000448174 155 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 SNORD4B-201ENST00000459083 72 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 RNU6-1116P-201ENST00000517269 99 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 DNAJC19P9-201ENST00000555084 351 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 AC012676.2-201ENST00000619258 186 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 SNORA50A-202ENST00000629536 136 ntBASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CNTNAP3Q9BZ76 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-461P-201ENST00000364195 107 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 SNORA24-201ENST00000384096 131 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-480P-201ENST00000384332 107 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-649P-201ENST00000384463 107 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 SNORA2B-201ENST00000384583 137 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-380P-201ENST00000410207 107 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 AL606517.2-201ENST00000442855 241 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 RN7SL297P-201ENST00000483161 293 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 RNU7-35P-201ENST00000517174 62 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 SNORD53-201ENST00000579969 78 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 SNORD3E-202ENST00000627253 216 ntBASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3Q9BZ76 Y_RNA.168-201ENST00000363740 102 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 Y_RNA.355-201ENST00000365462 98 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-471P-201ENST00000383944 106 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 MIR196B-201ENST00000384852 84 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 snoU13.11-201ENST00000459219 104 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 RNU7-53P-201ENST00000516705 60 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-958P-201ENST00000516995 106 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 UBL5P2-201ENST00000583788 219 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 AL020996.3-201ENST00000606617 222 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 AC027279.3-201ENST00000625055 122 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 MAPK10-362ENST00000641864 4484 ntBASIC3.07□□□□□ -1.92
CNTNAP3Q9BZ76 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-865P-201ENST00000364772 107 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 SNORA70.7-201ENST00000384159 133 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 Y_RNA.448-201ENST00000384185 108 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-163P-201ENST00000384396 106 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-800P-201ENST00000384473 103 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 RNU6-342P-201ENST00000384521 104 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 MIR1289-2-201ENST00000408360 111 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 AL513328.1-201ENST00000446460 224 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 MIR4791-201ENST00000607666 84 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 AP006437.1-201ENST00000641440 3685 ntBASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNTNAP3Q9BZ76 AC007336.1-201ENST00000576365 3828 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms