Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC022018.1-201ENST00000430685 241 ntBASIC3.49□□□□□ -1.85
LRCH3Q96II8 RNU6-579P-201ENST00000516879 102 ntBASIC3.49□□□□□ -1.85
LRCH3Q96II8 MIR548AR-201ENST00000582191 57 ntBASIC3.49□□□□□ -1.85
LRCH3Q96II8 AC022513.1-201ENST00000624512 117 ntBASIC3.49□□□□□ -1.85
LRCH3Q96II8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LRCH3Q96II8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.49□□□□□ -1.85
LRCH3Q96II8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRCH3Q96II8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
LRCH3Q96II8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
LRCH3Q96II8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRCH3Q96II8 SNORA71.1-201ENST00000364523 117 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 SNORA68.1-201ENST00000364537 132 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 MIR452-201ENST00000385020 85 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 MIR136-201ENST00000385207 82 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-447P-201ENST00000410293 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-1118P-201ENST00000410382 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-1076P-201ENST00000410397 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-355P-201ENST00000410427 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-791P-201ENST00000410467 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-705P-201ENST00000410601 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-1100P-201ENST00000410691 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-860P-201ENST00000410860 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-1217P-201ENST00000411276 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU6-785P-201ENST00000411324 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.48□□□□□ -1.85
LRCH3Q96II8 snoU13.23-201ENST00000458863 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 snoU13.15-201ENST00000459407 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RN7SL594P-201ENST00000470590 287 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 RNU7-12P-201ENST00000516030 62 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 U6.90-201ENST00000614007 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 U6.70-201ENST00000620287 104 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 MIR8065-201ENST00000620577 100 ntBASIC3.48□□□□□ -1.85
LRCH3Q96II8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRCH3Q96II8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRCH3Q96II8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
LRCH3Q96II8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRCH3Q96II8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
LRCH3Q96II8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRCH3Q96II8 MIR30E-201ENST00000362104 92 ntBASIC3.47□□□□□ -1.85
LRCH3Q96II8 SNORA63.2-201ENST00000362603 126 ntBASIC3.47□□□□□ -1.85
LRCH3Q96II8 Y_RNA.98-201ENST00000363109 102 ntBASIC3.47□□□□□ -1.85
LRCH3Q96II8 Y_RNA.386-201ENST00000383913 105 ntBASIC3.47□□□□□ -1.85
LRCH3Q96II8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LRCH3Q96II8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LRCH3Q96II8 RNU6-380P-201ENST00000410207 107 ntBASIC3.47□□□□□ -1.85
LRCH3Q96II8 RNU6-602P-201ENST00000411155 105 ntBASIC3.47□□□□□ -1.85
LRCH3Q96II8 AC006483.1-201ENST00000487308 313 ntBASIC3.47□□□□□ -1.85
LRCH3Q96II8 SNORA70.19-201ENST00000516717 90 ntBASIC3.47□□□□□ -1.85
LRCH3Q96II8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRCH3Q96II8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LRCH3Q96II8 SNORA26.7-201ENST00000391288 122 ntBASIC3.46□□□□□ -1.86
LRCH3Q96II8 SNORA11.4-201ENST00000408823 129 ntBASIC3.46□□□□□ -1.86
LRCH3Q96II8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.46□□□□□ -1.86
LRCH3Q96II8 AP001362.1-201ENST00000625165 124 ntBASIC3.46□□□□□ -1.86
LRCH3Q96II8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.46□□□□□ -1.86
LRCH3Q96II8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRCH3Q96II8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.45□□□□□ -1.86
LRCH3Q96II8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.45□□□□□ -1.86
LRCH3Q96II8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
LRCH3Q96II8 RNU6-23P-201ENST00000363283 107 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 SNORA7.4-201ENST00000384249 137 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 MIR764-201ENST00000390811 85 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 AL034345.1-201ENST00000407768 123 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 AC093850.1-201ENST00000454121 251 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 SNORD123-201ENST00000459473 70 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 SNORD59.2-201ENST00000516873 68 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 RNU6-448P-201ENST00000517052 107 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 MIR8055-201ENST00000610739 97 ntBASIC3.45□□□□□ -1.86
LRCH3Q96II8 MAPK10-322ENST00000641485 4530 ntBASIC3.44□□□□□ -1.86
LRCH3Q96II8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRCH3Q96II8 RNU6-161P-201ENST00000363051 106 ntBASIC3.44□□□□□ -1.86
LRCH3Q96II8 Y_RNA.532-201ENST00000384590 113 ntBASIC3.44□□□□□ -1.86
LRCH3Q96II8 AC015712.3-201ENST00000559380 164 ntBASIC3.44□□□□□ -1.86
LRCH3Q96II8 MIR5047-201ENST00000579212 100 ntBASIC3.44□□□□□ -1.86
LRCH3Q96II8 AC022149.2-201ENST00000621061 203 ntBASIC3.44□□□□□ -1.86
LRCH3Q96II8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRCH3Q96II8 U8.2-201ENST00000363156 134 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 RNA5SP139-201ENST00000364340 117 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 CD24P4-201ENST00000382840 243 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 Y_RNA.508-201ENST00000384502 114 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 RN7SKP220-201ENST00000410611 288 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 RNU7-85P-201ENST00000458851 63 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 RNU6-1108P-201ENST00000516308 104 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 MIR4796-201ENST00000580742 81 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 U6.98-201ENST00000637157 84 ntBASIC3.43□□□□□ -1.86
LRCH3Q96II8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRCH3Q96II8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRCH3Q96II8 Y_RNA.205-201ENST00000364128 113 ntBASIC3.42□□□□□ -1.86
LRCH3Q96II8 RNU6-634P-201ENST00000459134 106 ntBASIC3.42□□□□□ -1.86
LRCH3Q96II8 RNU7-170P-201ENST00000459303 61 ntBASIC3.42□□□□□ -1.86
LRCH3Q96II8 MIR2276-201ENST00000516886 89 ntBASIC3.42□□□□□ -1.86
LRCH3Q96II8 RNU6-548P-201ENST00000517083 115 ntBASIC3.42□□□□□ -1.86
LRCH3Q96II8 AC026333.2-201ENST00000542164 106 ntBASIC3.42□□□□□ -1.86
LRCH3Q96II8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRCH3Q96II8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRCH3Q96II8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRCH3Q96II8 AP000648.3-201ENST00000623539 4507 ntBASIC3.41□□□□□ -1.86
LRCH3Q96II8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms