Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VARS2Q5ST30 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VARS2Q5ST30 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VARS2Q5ST30 SNORD36A-201ENST00000362874 73 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 MIR592-201ENST00000384959 97 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 AC006989.1-201ENST00000427212 131 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 CYP2C59P-201ENST00000457790 269 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 SNORD123-201ENST00000459473 70 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 RPS27P21-201ENST00000486977 252 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 SCARNA11.3-201ENST00000517276 130 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 AC006386.2-201ENST00000624491 75 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 AC012005.1-201ENST00000624575 75 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 MIR7978-201ENST00000636158 59 ntBASIC3.68□□□□□ -1.82
VARS2Q5ST30 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VARS2Q5ST30 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VARS2Q5ST30 MIRLET7F1-201ENST00000362202 87 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 RNU6-1216P-201ENST00000362590 107 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 Y_RNA.42-201ENST00000362660 108 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 SNORD115-3-201ENST00000363100 82 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 Y_RNA.99-201ENST00000363138 105 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 SNORD115-22-201ENST00000364456 82 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 RNU6-808P-201ENST00000391233 108 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VARS2Q5ST30 AC018868.1-201ENST00000491307 315 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 RNU2-58P-201ENST00000516403 183 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 XIST_intron.1-201ENST00000619444 68 ntBASIC3.67□□□□□ -1.82
VARS2Q5ST30 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VARS2Q5ST30 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
VARS2Q5ST30 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
VARS2Q5ST30 MIR518E-201ENST00000385252 88 ntBASIC3.66□□□□□ -1.82
VARS2Q5ST30 RNA5SP168-201ENST00000516642 112 ntBASIC3.66□□□□□ -1.82
VARS2Q5ST30 MIR4500-201ENST00000579472 76 ntBASIC3.66□□□□□ -1.82
VARS2Q5ST30 AC104984.5-201ENST00000586878 94 ntBASIC3.66□□□□□ -1.82
VARS2Q5ST30 RPL12P50-201ENST00000603116 116 ntBASIC3.66□□□□□ -1.82
VARS2Q5ST30 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.66□□□□□ -1.82
VARS2Q5ST30 MIR7112-201ENST00000616126 65 ntBASIC3.66□□□□□ -1.82
VARS2Q5ST30 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
VARS2Q5ST30 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
VARS2Q5ST30 WWP1P1-201ENST00000466609 2769 ntBASIC3.65□□□□□ -1.82
VARS2Q5ST30 MIR218-1-201ENST00000384999 110 ntBASIC3.65□□□□□ -1.83
VARS2Q5ST30 RNU6-1328P-201ENST00000410938 106 ntBASIC3.65□□□□□ -1.83
VARS2Q5ST30 RNU7-12P-201ENST00000516030 62 ntBASIC3.65□□□□□ -1.83
VARS2Q5ST30 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
VARS2Q5ST30 AL356274.2-201ENST00000624379 3752 ntBASIC3.65□□□□□ -1.83
VARS2Q5ST30 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VARS2Q5ST30 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VARS2Q5ST30 Y_RNA.371-201ENST00000365591 113 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 RNU6-1237P-201ENST00000384777 107 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 SNORA40.6-201ENST00000391153 128 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 MIR2113-201ENST00000459007 91 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 S100A11P2-201ENST00000467589 312 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 CKS1BP2-201ENST00000497342 240 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 RNU6-667P-201ENST00000517186 102 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 AC026333.2-201ENST00000542164 106 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 AC141846.1-201ENST00000568348 142 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.64□□□□□ -1.83
VARS2Q5ST30 AL162274.2-201ENST00000614406 332 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 MIR7157-201ENST00000635801 60 ntBASIC3.64□□□□□ -1.83
VARS2Q5ST30 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VARS2Q5ST30 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VARS2Q5ST30 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.64□□□□□ -1.83
VARS2Q5ST30 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VARS2Q5ST30 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VARS2Q5ST30 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
VARS2Q5ST30 RNU6-1067P-201ENST00000384752 107 ntBASIC3.63□□□□□ -1.83
VARS2Q5ST30 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
VARS2Q5ST30 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.63□□□□□ -1.83
VARS2Q5ST30 RN7SKP132-201ENST00000516001 208 ntBASIC3.63□□□□□ -1.83
VARS2Q5ST30 MIR4276-201ENST00000584832 70 ntBASIC3.63□□□□□ -1.83
VARS2Q5ST30 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.63□□□□□ -1.83
VARS2Q5ST30 AL035425.3-201ENST00000564206 4996 ntBASIC3.63□□□□□ -1.83
VARS2Q5ST30 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VARS2Q5ST30 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
VARS2Q5ST30 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VARS2Q5ST30 RNU6-1254P-201ENST00000391266 104 ntBASIC3.62□□□□□ -1.83
VARS2Q5ST30 AC138749.4-201ENST00000563970 127 ntBASIC3.62□□□□□ -1.83
VARS2Q5ST30 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.62□□□□□ -1.83
VARS2Q5ST30 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.62□□□□□ -1.83
VARS2Q5ST30 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VARS2Q5ST30 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VARS2Q5ST30 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VARS2Q5ST30 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VARS2Q5ST30 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VARS2Q5ST30 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.62□□□□□ -1.83
VARS2Q5ST30 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.62□□□□□ -1.83
VARS2Q5ST30 RNA5SP374-201ENST00000362939 125 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 SNORD45.1-201ENST00000363181 77 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 SNORD113.1-201ENST00000363280 73 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 SNORA80A-201ENST00000363922 136 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 RNU6-466P-201ENST00000391224 103 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 AL034345.1-201ENST00000407768 123 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 BX276092.1-201ENST00000427368 251 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.61□□□□□ -1.83
VARS2Q5ST30 AL031183.1-201ENST00000457667 207 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 GABRG2-229ENST00000641017 3628 ntBASIC3.61□□□□□ -1.83
VARS2Q5ST30 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VARS2Q5ST30 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VARS2Q5ST30 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.6□□□□□ -1.83
VARS2Q5ST30 RNA5SP432-201ENST00000362480 116 ntBASIC3.6□□□□□ -1.83
VARS2Q5ST30 RNU6-1079P-201ENST00000362861 110 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms