Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 MIR3646-201ENST00000578301 84 ntBASIC1.92□□□□□ -2.1
ATP2B3Q16720 MIR3910-1-201ENST00000580936 111 ntBASIC1.92□□□□□ -2.1
ATP2B3Q16720 AL365205.2-201ENST00000594586 68 ntBASIC1.92□□□□□ -2.1
ATP2B3Q16720 AC103810.8-201ENST00000607347 118 ntBASIC1.92□□□□□ -2.1
ATP2B3Q16720 WWP1P1-201ENST00000466609 2769 ntBASIC1.91□□□□□ -2.1
ATP2B3Q16720 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ATP2B3Q16720 U8.1-201ENST00000362843 134 ntBASIC1.91□□□□□ -2.1
ATP2B3Q16720 RNU1-42P-201ENST00000364033 160 ntBASIC1.91□□□□□ -2.1
ATP2B3Q16720 RNU6-704P-201ENST00000364162 103 ntBASIC1.91□□□□□ -2.1
ATP2B3Q16720 RNU6-60P-201ENST00000364792 103 ntBASIC1.91□□□□□ -2.1
ATP2B3Q16720 BTF3P4-201ENST00000418852 495 ntBASIC1.91□□□□□ -2.1
ATP2B3Q16720 SNORA18.4-201ENST00000516440 124 ntBASIC1.91□□□□□ -2.1
ATP2B3Q16720 RNU6-126P-201ENST00000516685 103 ntBASIC1.91□□□□□ -2.1
ATP2B3Q16720 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ATP2B3Q16720 MIR378A-201ENST00000362177 66 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 RNU6-414P-201ENST00000363705 104 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 SNORD115-28-201ENST00000363931 81 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 Y_RNA.343-201ENST00000365354 112 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 Y_RNA.494-201ENST00000384432 111 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 MIR30A-201ENST00000385092 71 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 MIR613-201ENST00000385248 95 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 RNU6-938P-201ENST00000411285 103 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 AC004965.1-201ENST00000413033 213 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 AL161935.2-201ENST00000414627 60 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 RPL30P13-201ENST00000418873 348 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 AC008834.1-201ENST00000511612 175 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 RNU4-57P-201ENST00000515980 135 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 RNU6-917P-201ENST00000516294 104 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 RNU2-60P-201ENST00000517290 128 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.9□□□□□ -2.11
ATP2B3Q16720 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
ATP2B3Q16720 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
ATP2B3Q16720 AC010332.2-201ENST00000613083 1904 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 AL157777.2-201ENST00000258070 137 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 Y_RNA.37-201ENST00000362606 108 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 Y_RNA.52-201ENST00000362760 96 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 Y_RNA.294-201ENST00000364916 102 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 SNORD38C-201ENST00000384381 69 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 Y_RNA.542-201ENST00000384641 111 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ATP2B3Q16720 RNA5SP127-201ENST00000411051 133 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.89□□□□□ -2.11
ATP2B3Q16720 FAM106DP-201ENST00000586416 501 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 MIR8074-201ENST00000615081 81 ntBASIC1.89□□□□□ -2.11
ATP2B3Q16720 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.88□□□□□ -2.11
ATP2B3Q16720 RNA5SP259-201ENST00000365541 109 ntBASIC1.88□□□□□ -2.11
ATP2B3Q16720 MIR517C-201ENST00000385103 95 ntBASIC1.88□□□□□ -2.11
ATP2B3Q16720 MIR513A1-201ENST00000385138 129 ntBASIC1.88□□□□□ -2.11
ATP2B3Q16720 SNORA67.6-201ENST00000391093 99 ntBASIC1.88□□□□□ -2.11
ATP2B3Q16720 MTND4LP9-201ENST00000427694 174 ntBASIC1.88□□□□□ -2.11
ATP2B3Q16720 JTBP1-201ENST00000441314 247 ntBASIC1.88□□□□□ -2.11
ATP2B3Q16720 SNORA18.7-201ENST00000516910 131 ntBASIC1.88□□□□□ -2.11
ATP2B3Q16720 AC091895.1-201ENST00000624494 256 ntBASIC1.88□□□□□ -2.11
ATP2B3Q16720 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.88□□□□□ -2.11
ATP2B3Q16720 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ATP2B3Q16720 Y_RNA.242-201ENST00000364473 110 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 RNU6-915P-201ENST00000364943 103 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 SNORA19-201ENST00000384737 128 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 MIR624-201ENST00000385217 97 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 SNORD28B-201ENST00000390993 75 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 Y_RNA.584-201ENST00000391090 114 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 Y_RNA.586-201ENST00000391146 98 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 MIR1267-201ENST00000408723 78 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 AP1B1P2-201ENST00000416196 106 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 AL392103.1-201ENST00000447000 198 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 SNORA77B-201ENST00000578179 125 ntBASIC1.87□□□□□ -2.11
ATP2B3Q16720 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ATP2B3Q16720 AL442644.1-201ENST00000454390 3105 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 RNU6-1123P-201ENST00000362347 106 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 MIR570-201ENST00000384917 97 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 MIR452-201ENST00000385020 85 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.86□□□□□ -2.11
ATP2B3Q16720 RNU7-95P-201ENST00000459222 64 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 RNU6-1149P-201ENST00000516810 97 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 DNAJC19P9-201ENST00000555084 351 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.86□□□□□ -2.11
ATP2B3Q16720 AC131055.1-201ENST00000584626 316 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 U2.22-201ENST00000636441 106 ntBASIC1.86□□□□□ -2.11
ATP2B3Q16720 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
ATP2B3Q16720 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 TMSB4XP3-201ENST00000445144 114 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 RNU5E-3P-201ENST00000515913 68 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 RNU6-971P-201ENST00000516920 106 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 AP003484.1-201ENST00000530974 250 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 MIR4498-201ENST00000577599 66 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 AL512598.1-201ENST00000610158 273 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
ATP2B3Q16720 Y_RNA.241-201ENST00000364470 117 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 RNU6-309P-201ENST00000364573 106 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 Y_RNA.338-201ENST00000365320 114 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 MIR136-201ENST00000385207 82 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 U8.17-201ENST00000391292 132 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 RNU6-406P-201ENST00000516470 107 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 SCARNA15-202ENST00000516881 127 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 SNORA31.24-201ENST00000517232 57 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 MIR5197-201ENST00000583721 112 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 AP001485.1-201ENST00000604799 199 ntBASIC1.84□□□□□ -2.11
ATP2B3Q16720 snoU13.31-201ENST00000607291 104 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 211.4 ms