Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR513C-201ENST00000401352 84 ntBASIC1.73□□□□□ -2.13
COPB1P53618 RNU6-938P-201ENST00000411285 103 ntBASIC1.73□□□□□ -2.13
COPB1P53618 AC004965.1-201ENST00000413033 213 ntBASIC1.73□□□□□ -2.13
COPB1P53618 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.73□□□□□ -2.13
COPB1P53618 JTBP1-201ENST00000441314 247 ntBASIC1.73□□□□□ -2.13
COPB1P53618 RNU4-57P-201ENST00000515980 135 ntBASIC1.73□□□□□ -2.13
COPB1P53618 MIR4778-201ENST00000577635 80 ntBASIC1.73□□□□□ -2.13
COPB1P53618 SNORA77B-201ENST00000578179 125 ntBASIC1.73□□□□□ -2.13
COPB1P53618 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
COPB1P53618 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
COPB1P53618 MIR376A2-201ENST00000636782 80 ntBASIC1.73□□□□□ -2.13
COPB1P53618 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COPB1P53618 SNORD38C-201ENST00000384381 69 ntBASIC1.72□□□□□ -2.13
COPB1P53618 MIR526A1-201ENST00000384897 85 ntBASIC1.72□□□□□ -2.13
COPB1P53618 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
COPB1P53618 RNA5SP127-201ENST00000411051 133 ntBASIC1.72□□□□□ -2.13
COPB1P53618 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.72□□□□□ -2.13
COPB1P53618 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.72□□□□□ -2.13
COPB1P53618 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
COPB1P53618 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
COPB1P53618 AC134878.1-201ENST00000619901 243 ntBASIC1.72□□□□□ -2.13
COPB1P53618 WWP1P1-201ENST00000466609 2769 ntBASIC1.72□□□□□ -2.13
COPB1P53618 AC010332.2-201ENST00000613083 1904 ntBASIC1.72□□□□□ -2.13
COPB1P53618 Y_RNA.37-201ENST00000362606 108 ntBASIC1.71□□□□□ -2.14
COPB1P53618 SNORD115-28-201ENST00000363931 81 ntBASIC1.71□□□□□ -2.14
COPB1P53618 RNU6-457P-201ENST00000363999 107 ntBASIC1.71□□□□□ -2.14
COPB1P53618 MIR452-201ENST00000385020 85 ntBASIC1.71□□□□□ -2.14
COPB1P53618 MIR320A-201ENST00000385302 82 ntBASIC1.71□□□□□ -2.14
COPB1P53618 Y_RNA.586-201ENST00000391146 98 ntBASIC1.71□□□□□ -2.14
COPB1P53618 RNU6-460P-201ENST00000391158 108 ntBASIC1.71□□□□□ -2.14
COPB1P53618 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
COPB1P53618 RNU6-257P-201ENST00000410238 98 ntBASIC1.71□□□□□ -2.14
COPB1P53618 TMSB4XP3-201ENST00000445144 114 ntBASIC1.71□□□□□ -2.14
COPB1P53618 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.71□□□□□ -2.14
COPB1P53618 RNU6-789P-201ENST00000517105 102 ntBASIC1.71□□□□□ -2.14
COPB1P53618 AC131055.1-201ENST00000584626 316 ntBASIC1.71□□□□□ -2.14
COPB1P53618 AP001340.1-201ENST00000624405 217 ntBASIC1.71□□□□□ -2.14
COPB1P53618 RNY1P10-201ENST00000363268 113 ntBASIC1.7□□□□□ -2.14
COPB1P53618 Y_RNA.226-201ENST00000364337 114 ntBASIC1.7□□□□□ -2.14
COPB1P53618 RNU6-81P-201ENST00000365608 104 ntBASIC1.7□□□□□ -2.14
COPB1P53618 Y_RNA.410-201ENST00000383992 113 ntBASIC1.7□□□□□ -2.14
COPB1P53618 Y_RNA.420-201ENST00000384043 110 ntBASIC1.7□□□□□ -2.14
COPB1P53618 SNORA20-201ENST00000384662 132 ntBASIC1.7□□□□□ -2.14
COPB1P53618 Y_RNA.584-201ENST00000391090 114 ntBASIC1.7□□□□□ -2.14
COPB1P53618 SNORA18.4-201ENST00000516440 124 ntBASIC1.7□□□□□ -2.14
COPB1P53618 RNU2-60P-201ENST00000517290 128 ntBASIC1.7□□□□□ -2.14
COPB1P53618 AP001485.1-201ENST00000604799 199 ntBASIC1.7□□□□□ -2.14
COPB1P53618 AC015726.2-201ENST00000620112 122 ntBASIC1.7□□□□□ -2.14
COPB1P53618 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.7□□□□□ -2.14
COPB1P53618 Y_RNA.52-201ENST00000362760 96 ntBASIC1.69□□□□□ -2.14
COPB1P53618 RNU6-414P-201ENST00000363705 104 ntBASIC1.69□□□□□ -2.14
COPB1P53618 MIR516B2-201ENST00000385190 85 ntBASIC1.69□□□□□ -2.14
COPB1P53618 MIR1287-201ENST00000408492 90 ntBASIC1.69□□□□□ -2.14
COPB1P53618 MTND4LP9-201ENST00000427694 174 ntBASIC1.69□□□□□ -2.14
COPB1P53618 SNORD36C-201ENST00000516733 66 ntBASIC1.69□□□□□ -2.14
COPB1P53618 SCARNA15-202ENST00000516881 127 ntBASIC1.69□□□□□ -2.14
COPB1P53618 SUMO2P16-201ENST00000519475 264 ntBASIC1.69□□□□□ -2.14
COPB1P53618 SNORD113-1-201ENST00000365321 69 ntBASIC1.68□□□□□ -2.14
COPB1P53618 MIR136-201ENST00000385207 82 ntBASIC1.68□□□□□ -2.14
COPB1P53618 MIR653-201ENST00000385279 96 ntBASIC1.68□□□□□ -2.14
COPB1P53618 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COPB1P53618 AC087499.4-201ENST00000448505 178 ntBASIC1.68□□□□□ -2.14
COPB1P53618 RNU6-917P-201ENST00000516294 104 ntBASIC1.68□□□□□ -2.14
COPB1P53618 AC015688.6-201ENST00000577737 104 ntBASIC1.68□□□□□ -2.14
COPB1P53618 MIR5197-201ENST00000583721 112 ntBASIC1.68□□□□□ -2.14
COPB1P53618 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COPB1P53618 AL157777.2-201ENST00000258070 137 ntBASIC1.67□□□□□ -2.14
COPB1P53618 Y_RNA.120-201ENST00000363304 110 ntBASIC1.67□□□□□ -2.14
COPB1P53618 RNU6-1189P-201ENST00000383958 107 ntBASIC1.67□□□□□ -2.14
COPB1P53618 SNORA40-201ENST00000388090 126 ntBASIC1.67□□□□□ -2.14
COPB1P53618 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
COPB1P53618 BTF3P4-201ENST00000418852 495 ntBASIC1.67□□□□□ -2.14
COPB1P53618 RNA5SP236-201ENST00000516169 116 ntBASIC1.67□□□□□ -2.14
COPB1P53618 Y_RNA.686-201ENST00000516548 134 ntBASIC1.67□□□□□ -2.14
COPB1P53618 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.67□□□□□ -2.14
COPB1P53618 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
COPB1P53618 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
COPB1P53618 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.67□□□□□ -2.14
COPB1P53618 AC132825.6-201ENST00000638861 357 ntBASIC1.67□□□□□ -2.14
COPB1P53618 ICE2P2-201ENST00000483823 2787 ntBASIC1.66□□□□□ -2.14
COPB1P53618 U8.1-201ENST00000362843 134 ntBASIC1.66□□□□□ -2.14
COPB1P53618 Y_RNA.440-201ENST00000384120 114 ntBASIC1.66□□□□□ -2.14
COPB1P53618 Y_RNA.494-201ENST00000384432 111 ntBASIC1.66□□□□□ -2.14
COPB1P53618 SNORA17.3-201ENST00000391159 129 ntBASIC1.66□□□□□ -2.14
COPB1P53618 U8.17-201ENST00000391292 132 ntBASIC1.66□□□□□ -2.14
COPB1P53618 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
COPB1P53618 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.66□□□□□ -2.14
COPB1P53618 AC023790.1-201ENST00000482174 347 ntBASIC1.66□□□□□ -2.14
COPB1P53618 AP003484.1-201ENST00000530974 250 ntBASIC1.66□□□□□ -2.14
COPB1P53618 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.66□□□□□ -2.14
COPB1P53618 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
COPB1P53618 MTND5P32-201ENST00000560711 1802 ntBASIC1.66□□□□□ -2.14
COPB1P53618 SNORA2.2-201ENST00000365473 135 ntBASIC1.65□□□□□ -2.15
COPB1P53618 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
COPB1P53618 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
COPB1P53618 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
COPB1P53618 RNU6-1149P-201ENST00000516810 97 ntBASIC1.65□□□□□ -2.15
COPB1P53618 RNU7-181P-201ENST00000517234 74 ntBASIC1.65□□□□□ -2.15
COPB1P53618 AP001328.1-201ENST00000528550 176 ntBASIC1.65□□□□□ -2.15
COPB1P53618 FAM106DP-201ENST00000586416 501 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms