Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MIR548AE2-201ENST00000583456 67 ntBASIC3.71□□□□□ -1.82
PRIM1P49642 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PRIM1P49642 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRIM1P49642 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRIM1P49642 Y_RNA.190-201ENST00000363964 101 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 Y_RNA.437-201ENST00000384113 113 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 AL138827.1-201ENST00000402666 306 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 UQCRHP3-201ENST00000451503 251 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 RNU7-67P-201ENST00000459003 62 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 AC006483.1-201ENST00000487308 313 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 RNU7-181P-201ENST00000517234 74 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 MIR548Z-201ENST00000584743 97 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 AC091304.10-201ENST00000641554 121 ntBASIC3.7□□□□□ -1.82
PRIM1P49642 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PRIM1P49642 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRIM1P49642 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PRIM1P49642 RNA5SP68-201ENST00000363885 119 ntBASIC3.69□□□□□ -1.82
PRIM1P49642 SNORD21-201ENST00000383953 95 ntBASIC3.69□□□□□ -1.82
PRIM1P49642 MIR136-201ENST00000385207 82 ntBASIC3.69□□□□□ -1.82
PRIM1P49642 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.69□□□□□ -1.82
PRIM1P49642 AC073261.1-201ENST00000429409 121 ntBASIC3.69□□□□□ -1.82
PRIM1P49642 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.69□□□□□ -1.82
PRIM1P49642 RNU7-73P-201ENST00000458743 63 ntBASIC3.69□□□□□ -1.82
PRIM1P49642 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRIM1P49642 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRIM1P49642 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.68□□□□□ -1.82
PRIM1P49642 RNU6-859P-201ENST00000362728 107 ntBASIC3.68□□□□□ -1.82
PRIM1P49642 SNORD58A-201ENST00000383875 65 ntBASIC3.68□□□□□ -1.82
PRIM1P49642 SNORA24-201ENST00000384096 131 ntBASIC3.68□□□□□ -1.82
PRIM1P49642 Y_RNA.494-201ENST00000384432 111 ntBASIC3.68□□□□□ -1.82
PRIM1P49642 SNORA67.4-201ENST00000384688 142 ntBASIC3.68□□□□□ -1.82
PRIM1P49642 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.68□□□□□ -1.82
PRIM1P49642 RNU6-1116P-201ENST00000517269 99 ntBASIC3.68□□□□□ -1.82
PRIM1P49642 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRIM1P49642 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PRIM1P49642 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.67□□□□□ -1.82
PRIM1P49642 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRIM1P49642 RNU6-787P-201ENST00000384032 107 ntBASIC3.67□□□□□ -1.82
PRIM1P49642 SNORA70B-201ENST00000384210 135 ntBASIC3.67□□□□□ -1.82
PRIM1P49642 MIR9-1-201ENST00000385198 89 ntBASIC3.67□□□□□ -1.82
PRIM1P49642 U8.15-201ENST00000390947 134 ntBASIC3.67□□□□□ -1.82
PRIM1P49642 RN7SKP192-201ENST00000411291 327 ntBASIC3.67□□□□□ -1.82
PRIM1P49642 MIR6817-201ENST00000615588 66 ntBASIC3.67□□□□□ -1.82
PRIM1P49642 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PRIM1P49642 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PRIM1P49642 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRIM1P49642 RNU6-461P-201ENST00000364195 107 ntBASIC3.66□□□□□ -1.82
PRIM1P49642 Y_RNA.467-201ENST00000384297 102 ntBASIC3.66□□□□□ -1.82
PRIM1P49642 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRIM1P49642 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRIM1P49642 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRIM1P49642 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PRIM1P49642 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PRIM1P49642 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRIM1P49642 RNU1-58P-201ENST00000362413 163 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 SNORD38.1-201ENST00000363863 68 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 Y_RNA.470-201ENST00000384307 117 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 RNU7-12P-201ENST00000516030 62 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 RNA5SP148-201ENST00000516527 94 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 RNU6-1258P-201ENST00000516911 111 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 RNU6-958P-201ENST00000516995 106 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.65□□□□□ -1.83
PRIM1P49642 MIR6717-201ENST00000622747 73 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PRIM1P49642 AL021368.2-201ENST00000606125 5352 ntBASIC3.65□□□□□ -1.83
PRIM1P49642 RNA5SP274-201ENST00000410484 108 ntBASIC3.64□□□□□ -1.83
PRIM1P49642 Y_RNA.607-201ENST00000410597 98 ntBASIC3.64□□□□□ -1.83
PRIM1P49642 RNU7-34P-201ENST00000459394 64 ntBASIC3.64□□□□□ -1.83
PRIM1P49642 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRIM1P49642 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.63□□□□□ -1.83
PRIM1P49642 AC108206.1-201ENST00000570186 4159 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 Y_RNA.354-201ENST00000365448 111 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 SNORA26.6-201ENST00000391256 115 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 U8.16-201ENST00000391279 133 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 RNA5SP21-201ENST00000410917 96 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 AL445685.2-201ENST00000422551 342 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 RNU7-45P-201ENST00000459460 63 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 RNU6-237P-201ENST00000515985 71 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 RNU6-65P-201ENST00000516332 98 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 RNA5SP168-201ENST00000516642 112 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 SNORD53-201ENST00000579969 78 ntBASIC3.63□□□□□ -1.83
PRIM1P49642 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRIM1P49642 RN7SKP123-201ENST00000410732 291 ntBASIC3.62□□□□□ -1.83
PRIM1P49642 RNA5SP385-201ENST00000515947 110 ntBASIC3.62□□□□□ -1.83
PRIM1P49642 RNU7-2P-201ENST00000516096 62 ntBASIC3.62□□□□□ -1.83
PRIM1P49642 SNORA31.10-201ENST00000516482 106 ntBASIC3.62□□□□□ -1.83
PRIM1P49642 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.62□□□□□ -1.83
PRIM1P49642 MIR7843-201ENST00000622274 79 ntBASIC3.62□□□□□ -1.83
PRIM1P49642 AC007336.1-201ENST00000576365 3828 ntBASIC3.62□□□□□ -1.83
PRIM1P49642 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PRIM1P49642 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRIM1P49642 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRIM1P49642 Y_RNA.313-201ENST00000365095 103 ntBASIC3.61□□□□□ -1.83
PRIM1P49642 RNY1P4-201ENST00000384595 115 ntBASIC3.61□□□□□ -1.83
PRIM1P49642 AC090844.1-201ENST00000422019 156 ntBASIC3.61□□□□□ -1.83
PRIM1P49642 RNA5SP24-201ENST00000516478 95 ntBASIC3.61□□□□□ -1.83
PRIM1P49642 RNU6-267P-201ENST00000516714 103 ntBASIC3.61□□□□□ -1.83
PRIM1P49642 MIR4506-201ENST00000584693 77 ntBASIC3.61□□□□□ -1.83
PRIM1P49642 AL020996.3-201ENST00000606617 222 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms