Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD11P31277 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD11P31277 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD11P31277 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD11P31277 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HOXD11P31277 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD11P31277 RNA5SP465-201ENST00000391195 109 ntBASIC4.43□□□□□ -1.7
HOXD11P31277 AC105272.1-201ENST00000438604 198 ntBASIC4.43□□□□□ -1.7
HOXD11P31277 RPL23AP42-201ENST00000471152 471 ntBASIC4.43□□□□□ -1.7
HOXD11P31277 RNU6-287P-201ENST00000516230 98 ntBASIC4.43□□□□□ -1.7
HOXD11P31277 RNU6-1089P-201ENST00000516473 104 ntBASIC4.43□□□□□ -1.7
HOXD11P31277 AC107068.1-201ENST00000563286 4218 ntBASIC4.43□□□□□ -1.7
HOXD11P31277 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD11P31277 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD11P31277 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD11P31277 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD11P31277 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXD11P31277 HDGFP1-201ENST00000405943 252 ntBASIC4.42□□□□□ -1.7
HOXD11P31277 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HOXD11P31277 U3.45-201ENST00000607547 219 ntBASIC4.42□□□□□ -1.7
HOXD11P31277 AL162274.2-201ENST00000614406 332 ntBASIC4.42□□□□□ -1.7
HOXD11P31277 MIR7111-201ENST00000619751 72 ntBASIC4.42□□□□□ -1.7
HOXD11P31277 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD11P31277 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXD11P31277 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD11P31277 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD11P31277 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HOXD11P31277 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD11P31277 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD11P31277 RNU6-930P-201ENST00000390938 100 ntBASIC4.41□□□□□ -1.7
HOXD11P31277 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD11P31277 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC4.41□□□□□ -1.7
HOXD11P31277 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HOXD11P31277 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.4□□□□□ -1.7
HOXD11P31277 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
HOXD11P31277 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXD11P31277 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD11P31277 MIR331-201ENST00000362302 94 ntBASIC4.4□□□□□ -1.71
HOXD11P31277 RNU6-495P-201ENST00000362995 107 ntBASIC4.4□□□□□ -1.71
HOXD11P31277 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD11P31277 MIR93-201ENST00000385024 80 ntBASIC4.4□□□□□ -1.71
HOXD11P31277 SNORA57.3-201ENST00000411095 141 ntBASIC4.4□□□□□ -1.71
HOXD11P31277 RN7SL274P-201ENST00000492268 272 ntBASIC4.4□□□□□ -1.71
HOXD11P31277 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD11P31277 NAMPTP3-201ENST00000569273 224 ntBASIC4.4□□□□□ -1.71
HOXD11P31277 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD11P31277 MIR3192-201ENST00000584920 77 ntBASIC4.4□□□□□ -1.71
HOXD11P31277 MIR6082-201ENST00000613604 109 ntBASIC4.4□□□□□ -1.71
HOXD11P31277 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD11P31277 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HOXD11P31277 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD11P31277 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD11P31277 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXD11P31277 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD11P31277 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HOXD11P31277 Y_RNA.13-201ENST00000362403 112 ntBASIC4.39□□□□□ -1.71
HOXD11P31277 RPS29P4-201ENST00000414733 161 ntBASIC4.39□□□□□ -1.71
HOXD11P31277 RN7SL691P-201ENST00000494487 301 ntBASIC4.39□□□□□ -1.71
HOXD11P31277 MIR3657-201ENST00000584818 117 ntBASIC4.39□□□□□ -1.71
HOXD11P31277 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.39□□□□□ -1.71
HOXD11P31277 uc_338.32-201ENST00000615087 172 ntBASIC4.39□□□□□ -1.71
HOXD11P31277 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD11P31277 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.39□□□□□ -1.71
HOXD11P31277 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD11P31277 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
HOXD11P31277 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD11P31277 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HOXD11P31277 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD11P31277 AL359511.1-201ENST00000402970 211 ntBASIC4.38□□□□□ -1.71
HOXD11P31277 MIR1283-2-201ENST00000408621 87 ntBASIC4.38□□□□□ -1.71
HOXD11P31277 RHEBP3-201ENST00000411920 351 ntBASIC4.38□□□□□ -1.71
HOXD11P31277 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD11P31277 AC012531.5-201ENST00000611375 151 ntBASIC4.38□□□□□ -1.71
HOXD11P31277 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD11P31277 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXD11P31277 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXD11P31277 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD11P31277 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXD11P31277 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD11P31277 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD11P31277 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
HOXD11P31277 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD11P31277 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HOXD11P31277 MIR7-2-201ENST00000384970 110 ntBASIC4.37□□□□□ -1.71
HOXD11P31277 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD11P31277 Y_RNA.676-201ENST00000516393 96 ntBASIC4.37□□□□□ -1.71
HOXD11P31277 IGLVVI-22-1-201ENST00000521183 211 ntBASIC4.37□□□□□ -1.71
HOXD11P31277 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HOXD11P31277 ZNF355P-201ENST00000427301 3216 ntBASIC4.37□□□□□ -1.71
HOXD11P31277 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD11P31277 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD11P31277 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD11P31277 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HOXD11P31277 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD11P31277 Z82217.1-201ENST00000625157 8149 ntBASIC4.36□□□□□ -1.71
HOXD11P31277 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD11P31277 SNORD115-44-201ENST00000365391 82 ntBASIC4.36□□□□□ -1.71
HOXD11P31277 MAPK10-320ENST00000641462 6696 ntBASIC4.36□□□□□ -1.71
HOXD11P31277 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HOXD11P31277 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms