Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC010297.1-201ENST00000623948 149 ntBASIC2.9□□□□□ -1.95
RXRBP28702 MIR2052-201ENST00000636055 55 ntBASIC2.9□□□□□ -1.95
RXRBP28702 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
RXRBP28702 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
RXRBP28702 RNU6-820P-201ENST00000384273 107 ntBASIC2.89□□□□□ -1.95
RXRBP28702 MIR450A2-201ENST00000385022 100 ntBASIC2.89□□□□□ -1.95
RXRBP28702 U8.17-201ENST00000391292 132 ntBASIC2.89□□□□□ -1.95
RXRBP28702 AL163195.1-201ENST00000496941 348 ntBASIC2.89□□□□□ -1.95
RXRBP28702 U4atac.1-201ENST00000618345 95 ntBASIC2.89□□□□□ -1.95
RXRBP28702 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RXRBP28702 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.88□□□□□ -1.95
RXRBP28702 SNORD68-201ENST00000363214 84 ntBASIC2.88□□□□□ -1.95
RXRBP28702 SNORD114-26-201ENST00000363543 72 ntBASIC2.88□□□□□ -1.95
RXRBP28702 Y_RNA.265-201ENST00000364677 108 ntBASIC2.88□□□□□ -1.95
RXRBP28702 RNA5SP190-201ENST00000365222 118 ntBASIC2.88□□□□□ -1.95
RXRBP28702 MIR759-201ENST00000390224 91 ntBASIC2.88□□□□□ -1.95
RXRBP28702 RNU6-220P-201ENST00000390919 107 ntBASIC2.88□□□□□ -1.95
RXRBP28702 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.88□□□□□ -1.95
RXRBP28702 RNA5SP492-201ENST00000411330 114 ntBASIC2.88□□□□□ -1.95
RXRBP28702 AL606517.2-201ENST00000442855 241 ntBASIC2.88□□□□□ -1.95
RXRBP28702 RNA5SP200-201ENST00000516360 103 ntBASIC2.88□□□□□ -1.95
RXRBP28702 Y_RNA.685-201ENST00000516532 108 ntBASIC2.88□□□□□ -1.95
RXRBP28702 SCARNA16.3-201ENST00000516595 184 ntBASIC2.88□□□□□ -1.95
RXRBP28702 RNU6-667P-201ENST00000517186 102 ntBASIC2.88□□□□□ -1.95
RXRBP28702 AC026421.1-201ENST00000519101 163 ntBASIC2.88□□□□□ -1.95
RXRBP28702 MIR3683-201ENST00000580847 82 ntBASIC2.88□□□□□ -1.95
RXRBP28702 MIR6132-201ENST00000622083 109 ntBASIC2.88□□□□□ -1.95
RXRBP28702 AC091932.4-201ENST00000623386 200 ntBASIC2.88□□□□□ -1.95
RXRBP28702 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RXRBP28702 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
RXRBP28702 SNORD14E-201ENST00000364009 85 ntBASIC2.87□□□□□ -1.95
RXRBP28702 RNU1-133P-201ENST00000364867 167 ntBASIC2.87□□□□□ -1.95
RXRBP28702 SNORA8-201ENST00000384574 139 ntBASIC2.87□□□□□ -1.95
RXRBP28702 RNU6-893P-201ENST00000458841 100 ntBASIC2.87□□□□□ -1.95
RXRBP28702 RNU1-131P-201ENST00000458943 161 ntBASIC2.87□□□□□ -1.95
RXRBP28702 SNORD13-201ENST00000459299 104 ntBASIC2.87□□□□□ -1.95
RXRBP28702 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.87□□□□□ -1.95
RXRBP28702 SNORD45.4-201ENST00000516629 73 ntBASIC2.87□□□□□ -1.95
RXRBP28702 AP003484.1-201ENST00000530974 250 ntBASIC2.87□□□□□ -1.95
RXRBP28702 MIR3163-201ENST00000581592 73 ntBASIC2.87□□□□□ -1.95
RXRBP28702 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.87□□□□□ -1.95
RXRBP28702 RPL23AP63-201ENST00000498752 471 ntBASIC2.86□□□□□ -1.95
RXRBP28702 AC087741.2-201ENST00000619415 172 ntBASIC2.86□□□□□ -1.95
RXRBP28702 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RXRBP28702 MIR494-201ENST00000349529 81 ntBASIC2.85□□□□□ -1.95
RXRBP28702 Y_RNA.107-201ENST00000363190 121 ntBASIC2.85□□□□□ -1.95
RXRBP28702 RNU6-1099P-201ENST00000363533 107 ntBASIC2.85□□□□□ -1.95
RXRBP28702 RNU6-816P-201ENST00000390914 107 ntBASIC2.85□□□□□ -1.95
RXRBP28702 RNU6-1268P-201ENST00000391214 107 ntBASIC2.85□□□□□ -1.95
RXRBP28702 RNU6-1239P-201ENST00000391310 107 ntBASIC2.85□□□□□ -1.95
RXRBP28702 Y_RNA.593-201ENST00000410292 98 ntBASIC2.85□□□□□ -1.95
RXRBP28702 AL445687.1-201ENST00000439946 251 ntBASIC2.85□□□□□ -1.95
RXRBP28702 PGBD4P5-201ENST00000445958 426 ntBASIC2.85□□□□□ -1.95
RXRBP28702 RPL39P25-201ENST00000449384 154 ntBASIC2.85□□□□□ -1.95
RXRBP28702 ATP5J2P3-201ENST00000451550 258 ntBASIC2.85□□□□□ -1.95
RXRBP28702 RNU7-94P-201ENST00000459576 63 ntBASIC2.85□□□□□ -1.95
RXRBP28702 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.85□□□□□ -1.95
RXRBP28702 AC024995.1-201ENST00000523014 93 ntBASIC2.85□□□□□ -1.95
RXRBP28702 MIR6766-201ENST00000622641 72 ntBASIC2.85□□□□□ -1.95
RXRBP28702 AL442644.1-201ENST00000454390 3105 ntBASIC2.85□□□□□ -1.95
RXRBP28702 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RXRBP28702 SNORA63D-201ENST00000364359 132 ntBASIC2.84□□□□□ -1.95
RXRBP28702 snoU2-30.1-201ENST00000365012 70 ntBASIC2.84□□□□□ -1.95
RXRBP28702 Y_RNA.351-201ENST00000365436 96 ntBASIC2.84□□□□□ -1.95
RXRBP28702 MIR802-201ENST00000390235 94 ntBASIC2.84□□□□□ -1.95
RXRBP28702 MIR1262-201ENST00000408276 93 ntBASIC2.84□□□□□ -1.95
RXRBP28702 HMGN2P35-201ENST00000412164 270 ntBASIC2.84□□□□□ -1.95
RXRBP28702 SRIP3-201ENST00000413200 219 ntBASIC2.84□□□□□ -1.95
RXRBP28702 RPPH1-2P-201ENST00000516688 293 ntBASIC2.84□□□□□ -1.95
RXRBP28702 AL355297.2-201ENST00000604792 129 ntBASIC2.84□□□□□ -1.95
RXRBP28702 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.84□□□□□ -1.95
RXRBP28702 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
RXRBP28702 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
RXRBP28702 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RXRBP28702 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
RXRBP28702 RNU6-1084P-201ENST00000362498 107 ntBASIC2.83□□□□□ -1.96
RXRBP28702 RNY3P2-201ENST00000362918 102 ntBASIC2.83□□□□□ -1.96
RXRBP28702 VTRNA1-1-201ENST00000363120 99 ntBASIC2.83□□□□□ -1.96
RXRBP28702 Y_RNA.99-201ENST00000363138 105 ntBASIC2.83□□□□□ -1.96
RXRBP28702 RNU4-16P-201ENST00000364737 141 ntBASIC2.83□□□□□ -1.96
RXRBP28702 Y_RNA.290-201ENST00000364879 114 ntBASIC2.83□□□□□ -1.96
RXRBP28702 Y_RNA.336-201ENST00000365307 109 ntBASIC2.83□□□□□ -1.96
RXRBP28702 SNORD78.1-201ENST00000390866 65 ntBASIC2.83□□□□□ -1.96
RXRBP28702 RNA5SP323-201ENST00000391094 133 ntBASIC2.83□□□□□ -1.96
RXRBP28702 MIR1912-201ENST00000410389 80 ntBASIC2.83□□□□□ -1.96
RXRBP28702 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.83□□□□□ -1.96
RXRBP28702 CST2P1-201ENST00000425770 87 ntBASIC2.83□□□□□ -1.96
RXRBP28702 AC087499.4-201ENST00000448505 178 ntBASIC2.83□□□□□ -1.96
RXRBP28702 AC113410.1-201ENST00000505029 247 ntBASIC2.83□□□□□ -1.96
RXRBP28702 SCARNA23-201ENST00000516060 130 ntBASIC2.83□□□□□ -1.96
RXRBP28702 RNU7-70P-201ENST00000516941 66 ntBASIC2.83□□□□□ -1.96
RXRBP28702 DEFB131E-201ENST00000532329 154 ntBASIC2.83□□□□□ -1.96
RXRBP28702 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.83□□□□□ -1.96
RXRBP28702 MIR3618-201ENST00000580330 88 ntBASIC2.83□□□□□ -1.96
RXRBP28702 RMST_2.1-201ENST00000617263 136 ntBASIC2.83□□□□□ -1.96
RXRBP28702 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.83□□□□□ -1.96
RXRBP28702 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
RXRBP28702 RNU6-862P-201ENST00000362804 105 ntBASIC2.82□□□□□ -1.96
RXRBP28702 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
RXRBP28702 RNU6-1072P-201ENST00000384703 107 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 254.2 ms