Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RN7SL385P-201ENST00000468873 276 ntBASIC3.92□□□□□ -1.78
CD44P16070 AL513423.1-201ENST00000621695 132 ntBASIC3.92□□□□□ -1.78
CD44P16070 AC068724.3-201ENST00000625906 87 ntBASIC3.92□□□□□ -1.78
CD44P16070 MIR4773-1-201ENST00000637203 78 ntBASIC3.92□□□□□ -1.78
CD44P16070 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD44P16070 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.92□□□□□ -1.78
CD44P16070 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD44P16070 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD44P16070 RNU6-1312P-201ENST00000362425 108 ntBASIC3.91□□□□□ -1.78
CD44P16070 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.91□□□□□ -1.78
CD44P16070 RNU2-37P-201ENST00000410695 177 ntBASIC3.91□□□□□ -1.78
CD44P16070 HMGN2P35-201ENST00000412164 270 ntBASIC3.91□□□□□ -1.78
CD44P16070 AC244098.3-201ENST00000424803 96 ntBASIC3.91□□□□□ -1.78
CD44P16070 RN7SL594P-201ENST00000470590 287 ntBASIC3.91□□□□□ -1.78
CD44P16070 AC023141.11-201ENST00000508864 202 ntBASIC3.91□□□□□ -1.78
CD44P16070 AC104619.4-201ENST00000510773 249 ntBASIC3.91□□□□□ -1.78
CD44P16070 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.91□□□□□ -1.78
CD44P16070 AC005786.1-201ENST00000588553 154 ntBASIC3.91□□□□□ -1.78
CD44P16070 U4.6-201ENST00000621618 127 ntBASIC3.91□□□□□ -1.78
CD44P16070 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CD44P16070 OTUD4P1-201ENST00000237841 3067 ntBASIC3.91□□□□□ -1.78
CD44P16070 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD44P16070 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CD44P16070 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CD44P16070 MIR563-201ENST00000385080 79 ntBASIC3.9□□□□□ -1.79
CD44P16070 SCARNA16.3-201ENST00000516595 184 ntBASIC3.9□□□□□ -1.79
CD44P16070 MIR3935-201ENST00000583472 104 ntBASIC3.9□□□□□ -1.79
CD44P16070 MIR4251-201ENST00000635819 61 ntBASIC3.9□□□□□ -1.79
CD44P16070 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CD44P16070 RNU6-1052P-201ENST00000411398 104 ntBASIC3.89□□□□□ -1.79
CD44P16070 AC244023.1-201ENST00000426884 112 ntBASIC3.89□□□□□ -1.79
CD44P16070 AC104389.3-201ENST00000445629 235 ntBASIC3.89□□□□□ -1.79
CD44P16070 RNU7-195P-201ENST00000458793 62 ntBASIC3.89□□□□□ -1.79
CD44P16070 RPS29P12-201ENST00000460178 152 ntBASIC3.89□□□□□ -1.79
CD44P16070 RNU2-27P-201ENST00000516185 142 ntBASIC3.89□□□□□ -1.79
CD44P16070 RNU6-719P-201ENST00000516671 104 ntBASIC3.89□□□□□ -1.79
CD44P16070 AC242498.1-201ENST00000604134 111 ntBASIC3.89□□□□□ -1.79
CD44P16070 AC007318.2-201ENST00000620999 243 ntBASIC3.89□□□□□ -1.79
CD44P16070 U6.100-201ENST00000636230 99 ntBASIC3.89□□□□□ -1.79
CD44P16070 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.89□□□□□ -1.79
CD44P16070 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
CD44P16070 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD44P16070 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CD44P16070 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CD44P16070 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD44P16070 AL353746.1-201ENST00000566293 6881 ntBASIC3.88□□□□□ -1.79
CD44P16070 RNU1-33P-201ENST00000364249 162 ntBASIC3.88□□□□□ -1.79
CD44P16070 MIR588-201ENST00000384900 83 ntBASIC3.88□□□□□ -1.79
CD44P16070 AC011753.1-201ENST00000451001 220 ntBASIC3.88□□□□□ -1.79
CD44P16070 MIR3160-1-201ENST00000577972 85 ntBASIC3.88□□□□□ -1.79
CD44P16070 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.88□□□□□ -1.79
CD44P16070 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CD44P16070 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD44P16070 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD44P16070 RNU6-461P-201ENST00000364195 107 ntBASIC3.87□□□□□ -1.79
CD44P16070 RNU6-382P-201ENST00000365181 106 ntBASIC3.87□□□□□ -1.79
CD44P16070 MIR520C-201ENST00000385005 87 ntBASIC3.87□□□□□ -1.79
CD44P16070 RNU6-531P-201ENST00000516694 104 ntBASIC3.87□□□□□ -1.79
CD44P16070 MTRNR2L2-201ENST00000604882 87 ntBASIC3.87□□□□□ -1.79
CD44P16070 AC021506.2-201ENST00000612354 169 ntBASIC3.87□□□□□ -1.79
CD44P16070 SCARNA4.1-201ENST00000628597 123 ntBASIC3.87□□□□□ -1.79
CD44P16070 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD44P16070 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD44P16070 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.87□□□□□ -1.79
CD44P16070 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.87□□□□□ -1.79
CD44P16070 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CD44P16070 RNU6-1177P-201ENST00000391058 104 ntBASIC3.86□□□□□ -1.79
CD44P16070 AL035423.1-201ENST00000420331 213 ntBASIC3.86□□□□□ -1.79
CD44P16070 MIR5094-201ENST00000578766 85 ntBASIC3.86□□□□□ -1.79
CD44P16070 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.86□□□□□ -1.79
CD44P16070 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CD44P16070 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD44P16070 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CD44P16070 MIR519A1-201ENST00000385257 85 ntBASIC3.85□□□□□ -1.79
CD44P16070 RNU6-935P-201ENST00000410371 100 ntBASIC3.85□□□□□ -1.79
CD44P16070 S100A11P1-201ENST00000477525 312 ntBASIC3.85□□□□□ -1.79
CD44P16070 AL121772.2-201ENST00000614331 297 ntBASIC3.85□□□□□ -1.79
CD44P16070 AP003355.3-201ENST00000623465 114 ntBASIC3.85□□□□□ -1.79
CD44P16070 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CD44P16070 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.84□□□□□ -1.79
CD44P16070 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.84□□□□□ -1.79
CD44P16070 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CD44P16070 RNA5SP124-201ENST00000362739 110 ntBASIC3.84□□□□□ -1.79
CD44P16070 Y_RNA.258-201ENST00000364613 105 ntBASIC3.84□□□□□ -1.79
CD44P16070 MIR451A-201ENST00000385059 72 ntBASIC3.84□□□□□ -1.79
CD44P16070 TRAJ51-201ENST00000504127 63 ntBASIC3.84□□□□□ -1.79
CD44P16070 RNA5SP137-201ENST00000516833 135 ntBASIC3.84□□□□□ -1.79
CD44P16070 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CD44P16070 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.8
CD44P16070 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CD44P16070 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.8
CD44P16070 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CD44P16070 MIR30D-201ENST00000362283 70 ntBASIC3.83□□□□□ -1.8
CD44P16070 RNU4-58P-201ENST00000363192 141 ntBASIC3.83□□□□□ -1.8
CD44P16070 MIR3074-201ENST00000384885 81 ntBASIC3.83□□□□□ -1.8
CD44P16070 SNORA9.3-201ENST00000516383 129 ntBASIC3.83□□□□□ -1.8
CD44P16070 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.83□□□□□ -1.8
CD44P16070 AL078603.1-201ENST00000603824 313 ntBASIC3.83□□□□□ -1.8
CD44P16070 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD44P16070 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms