Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.87□□□□□ -2.55
USH2AO75445 AP001542.1-201ENST00000591314 200 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 AC005520.5-201ENST00000613926 164 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-291P-201ENST00000384720 107 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 MTND4P25-201ENST00000441039 533 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-344P-201ENST00000516635 111 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 SNORD39.3-201ENST00000584451 71 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 AC009159.2-201ENST00000617603 606 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-978P-201ENST00000364371 103 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-75P-201ENST00000515944 104 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 MIR23C-201ENST00000579846 100 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 MIR548H5-201ENST00000580314 60 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 MIR548AG2-201ENST00000581228 64 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 MTCO2P11-201ENST00000431069 680 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 AC026470.2-201ENST00000561492 181 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 AC096586.1-201ENST00000610267 561 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-626P-201ENST00000363354 107 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 RNU6-560P-201ENST00000364007 108 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 MIR544A-201ENST00000384855 91 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 MIR548O-201ENST00000408583 114 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 PIGPP3-201ENST00000425307 415 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.88□□□□□ -2.55
USH2AO75445 AL157770.1-201ENST00000623049 439 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 MTND1P7-201ENST00000632801 297 ntBASIC-0.88□□□□□ -2.55
USH2AO75445 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 MIR539-201ENST00000365690 78 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 AL008718.3-201ENST00000610217 321 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 RMST_10.1-201ENST00000616309 154 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 MIR379-201ENST00000362218 67 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 RNY1P16-201ENST00000363063 111 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 RNU2-14P-201ENST00000411053 191 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 MTND4P3-201ENST00000417829 541 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.89□□□□□ -2.55
USH2AO75445 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.89□□□□□ -2.55
USH2AO75445 RNU6-767P-201ENST00000384132 107 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 SNORD116-20-201ENST00000384529 92 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 MIR522-201ENST00000385071 87 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 SNORA19.1-201ENST00000410656 129 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.89□□□□□ -2.55
USH2AO75445 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.89□□□□□ -2.55
USH2AO75445 U7.5-201ENST00000517224 61 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 MIR548AE1-201ENST00000583292 70 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 RNU7-10P-201ENST00000607194 63 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 RNU6-912P-201ENST00000363800 104 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 SNORD14E-201ENST00000364009 85 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 RNU6-80P-201ENST00000384195 107 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 RNU6-21P-201ENST00000384710 107 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.89□□□□□ -2.55
USH2AO75445 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 AC015724.1-201ENST00000478577 156 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 AC026585.1-201ENST00000619582 524 ntBASIC-0.89□□□□□ -2.55
USH2AO75445 SNORA72.3-201ENST00000365074 132 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 RNU6-449P-201ENST00000383914 107 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 AC019178.2-201ENST00000423595 505 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 GPR143P-201ENST00000434155 205 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 RNU6-528P-201ENST00000516926 100 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 AC011374.2-201ENST00000607135 526 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.9□□□□□ -2.55
USH2AO75445 RNU4-17P-201ENST00000365598 141 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 AC113618.1-201ENST00000416747 285 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 AC009902.1-201ENST00000519351 183 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.9□□□□□ -2.55
USH2AO75445 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.9□□□□□ -2.55
USH2AO75445 AL450270.1-201ENST00000606160 391 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 RNU6-777P-201ENST00000364265 104 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 MIR570-201ENST00000384917 97 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 RNU6-855P-201ENST00000410395 104 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 MTATP6P19-201ENST00000413797 659 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.9□□□□□ -2.55
USH2AO75445 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 AC078880.5-201ENST00000617845 421 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 AC079248.2-201ENST00000623779 326 ntBASIC-0.9□□□□□ -2.55
USH2AO75445 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 RNU6-437P-201ENST00000459408 95 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 RPL39P36-201ENST00000490784 156 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.91□□□□□ -2.55
USH2AO75445 RNU6-345P-201ENST00000517001 107 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 AC013734.1-201ENST00000619329 111 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 RNU6-552P-201ENST00000362869 119 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 RNU6-181P-201ENST00000363225 107 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 SNORA75B-201ENST00000384053 137 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.91□□□□□ -2.55
USH2AO75445 AF228730.4-201ENST00000421457 183 ntBASIC-0.91□□□□□ -2.55
USH2AO75445 MRPS10P1-201ENST00000448483 130 ntBASIC-0.91□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms