Protein–RNA interactions for Protein: C9J069

C9orf172, Uncharacterized protein C9orf172, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172C9J069 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf172C9J069 AL442644.1-201ENST00000454390 3105 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 RNU6-1244P-201ENST00000363614 108 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 SNORD38.1-201ENST00000363863 68 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 RNU6-160P-201ENST00000384591 107 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 MIR516B2-201ENST00000385190 85 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 RNU6-913P-201ENST00000390913 95 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 AL445685.2-201ENST00000422551 342 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 AC093729.1-201ENST00000513074 128 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 SNORA31.10-201ENST00000516482 106 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.77□□□□□ -1.97
C9orf172C9J069 AC079600.2-201ENST00000550076 130 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 AC027279.3-201ENST00000625055 122 ntBASIC2.77□□□□□ -1.97
C9orf172C9J069 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf172C9J069 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf172C9J069 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
C9orf172C9J069 AC009487.2-201ENST00000420969 6821 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf172C9J069 RNA5SP493-201ENST00000364115 91 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 SNORA68.1-201ENST00000364537 132 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 SNORA25B-201ENST00000365507 128 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 RNU6-342P-201ENST00000384521 104 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 Y_RNA.567-201ENST00000384736 106 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 MIR206-201ENST00000384872 86 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 MIR519C-201ENST00000385053 87 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 U8.16-201ENST00000391279 133 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 RNU1-143P-201ENST00000516296 146 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 MIR3945-201ENST00000581853 98 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.76□□□□□ -1.97
C9orf172C9J069 U1.23-201ENST00000610293 146 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 RNU1-68P-201ENST00000615382 146 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 U1.39-201ENST00000621562 146 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 AC093831.2-201ENST00000624393 3427 ntBASIC2.76□□□□□ -1.97
C9orf172C9J069 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
C9orf172C9J069 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
C9orf172C9J069 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf172C9J069 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf172C9J069 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf172C9J069 RNU4-82P-201ENST00000362443 140 ntBASIC2.75□□□□□ -1.97
C9orf172C9J069 SNORA9.2-201ENST00000365361 133 ntBASIC2.75□□□□□ -1.97
C9orf172C9J069 AL161932.1-201ENST00000437408 146 ntBASIC2.75□□□□□ -1.97
C9orf172C9J069 RPS29P28-201ENST00000446439 141 ntBASIC2.75□□□□□ -1.97
C9orf172C9J069 RNU6-56P-201ENST00000516986 93 ntBASIC2.75□□□□□ -1.97
C9orf172C9J069 AC140658.3-201ENST00000567603 271 ntBASIC2.75□□□□□ -1.97
C9orf172C9J069 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf172C9J069 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf172C9J069 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
C9orf172C9J069 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
C9orf172C9J069 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
C9orf172C9J069 RNA5SP344-201ENST00000411081 104 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 HMGN1P33-201ENST00000432945 451 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 RPS29P29-201ENST00000456396 171 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 AC004223.1-201ENST00000479840 271 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 RNA5SP217-201ENST00000515959 91 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 RNU7-53P-201ENST00000516705 60 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 DNAJC19P9-201ENST00000555084 351 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 MIR3169-201ENST00000578032 83 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 AC022513.1-201ENST00000624512 117 ntBASIC2.74□□□□□ -1.97
C9orf172C9J069 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
C9orf172C9J069 RNU6-220P-201ENST00000390919 107 ntBASIC2.73□□□□□ -1.97
C9orf172C9J069 MIR548G-201ENST00000408442 89 ntBASIC2.73□□□□□ -1.97
C9orf172C9J069 SNORD109B-201ENST00000458961 67 ntBASIC2.73□□□□□ -1.97
C9orf172C9J069 SNORD109A-201ENST00000459128 67 ntBASIC2.73□□□□□ -1.97
C9orf172C9J069 RNU7-153P-201ENST00000516455 62 ntBASIC2.73□□□□□ -1.97
C9orf172C9J069 AL513043.2-201ENST00000573941 143 ntBASIC2.73□□□□□ -1.97
C9orf172C9J069 AL020996.3-201ENST00000606617 222 ntBASIC2.73□□□□□ -1.97
C9orf172C9J069 U7.4-201ENST00000614961 63 ntBASIC2.73□□□□□ -1.97
C9orf172C9J069 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
C9orf172C9J069 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
C9orf172C9J069 SNORA1.2-201ENST00000365189 134 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
C9orf172C9J069 SNORA70.7-201ENST00000384159 133 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 SNORD28B-201ENST00000390993 75 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 HSPE1P9-201ENST00000440046 311 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 RNA5SP168-201ENST00000516642 112 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 AC104027.1-201ENST00000521887 300 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 RNU6-90P-201ENST00000606352 106 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 SNORA28-201ENST00000606769 126 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.72□□□□□ -1.97
C9orf172C9J069 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.71□□□□□ -1.97
C9orf172C9J069 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
C9orf172C9J069 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
C9orf172C9J069 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
C9orf172C9J069 AP000648.3-201ENST00000623539 4507 ntBASIC2.71□□□□□ -1.98
C9orf172C9J069 MIR148B-201ENST00000362252 99 ntBASIC2.71□□□□□ -1.98
C9orf172C9J069 RNU6-833P-201ENST00000363486 107 ntBASIC2.71□□□□□ -1.98
C9orf172C9J069 MIR181B2-201ENST00000385004 89 ntBASIC2.71□□□□□ -1.98
C9orf172C9J069 RNA5SP261-201ENST00000410536 106 ntBASIC2.71□□□□□ -1.98
C9orf172C9J069 SPINT5P-201ENST00000448174 155 ntBASIC2.71□□□□□ -1.98
C9orf172C9J069 SEM1P1-201ENST00000506694 209 ntBASIC2.71□□□□□ -1.98
C9orf172C9J069 RNU7-12P-201ENST00000516030 62 ntBASIC2.71□□□□□ -1.98
C9orf172C9J069 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.71□□□□□ -1.98
C9orf172C9J069 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
C9orf172C9J069 SNORA24-201ENST00000384096 131 ntBASIC2.7□□□□□ -1.98
C9orf172C9J069 Y_RNA.448-201ENST00000384185 108 ntBASIC2.7□□□□□ -1.98
C9orf172C9J069 Y_RNA.545-201ENST00000384652 105 ntBASIC2.7□□□□□ -1.98
C9orf172C9J069 MIR196B-201ENST00000384852 84 ntBASIC2.7□□□□□ -1.98
C9orf172C9J069 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms