Protein–RNA interactions for Protein: A7XYQ1

SOBP, Sine oculis-binding protein homolog, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOBPA7XYQ1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SOBPA7XYQ1 RNU1-23P-201ENST00000363361 144 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 SNORA1.2-201ENST00000365189 134 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 MIR34C-201ENST00000384831 77 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 MIR206-201ENST00000384872 86 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SOBPA7XYQ1 AC015922.2-201ENST00000435593 184 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 RPS29P28-201ENST00000446439 141 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
SOBPA7XYQ1 CKS1BP2-201ENST00000497342 240 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
SOBPA7XYQ1 DEFB122-202ENST00000569013 197 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 RNU6-90P-201ENST00000606352 106 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 MAPK10-266ENST00000641066 6555 ntBASIC3.2□□□□□ -1.9
SOBPA7XYQ1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SOBPA7XYQ1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SOBPA7XYQ1 RNU6-1307P-201ENST00000391012 103 ntBASIC3.19□□□□□ -1.9
SOBPA7XYQ1 RNA5SP184-201ENST00000411071 108 ntBASIC3.19□□□□□ -1.9
SOBPA7XYQ1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.19□□□□□ -1.9
SOBPA7XYQ1 RNU6-871P-201ENST00000516122 100 ntBASIC3.19□□□□□ -1.9
SOBPA7XYQ1 RNU6-917P-201ENST00000516294 104 ntBASIC3.19□□□□□ -1.9
SOBPA7XYQ1 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
SOBPA7XYQ1 RNU6-548P-201ENST00000517083 115 ntBASIC3.19□□□□□ -1.9
SOBPA7XYQ1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.19□□□□□ -1.9
SOBPA7XYQ1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.19□□□□□ -1.9
SOBPA7XYQ1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.19□□□□□ -1.9
SOBPA7XYQ1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SOBPA7XYQ1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.18□□□□□ -1.9
SOBPA7XYQ1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
SOBPA7XYQ1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SOBPA7XYQ1 Y_RNA.118-201ENST00000363300 101 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 Y_RNA.226-201ENST00000364337 114 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 SNORA32-201ENST00000384072 121 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 MIR1236-201ENST00000408340 102 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 RNA5SP344-201ENST00000411081 104 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 AC245047.3-201ENST00000429428 127 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 RNU7-73P-201ENST00000458743 63 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 RNU7-181P-201ENST00000517234 74 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 AC007336.1-201ENST00000576365 3828 ntBASIC3.18□□□□□ -1.9
SOBPA7XYQ1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 Y_RNA.340-201ENST00000365330 92 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 RNU6-411P-201ENST00000384451 107 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 MIR218-1-201ENST00000384999 110 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 RNU6-1328P-201ENST00000410938 106 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 RN7SKP192-201ENST00000411291 327 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 AC087499.7-201ENST00000441958 109 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 RNU1-98P-201ENST00000458992 160 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 snoU13.15-201ENST00000459407 104 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 RNU7-35P-201ENST00000517174 62 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 AL020996.3-201ENST00000606617 222 ntBASIC3.17□□□□□ -1.9
SOBPA7XYQ1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.17□□□□□ -1.9
SOBPA7XYQ1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 MIRLET7A1-201ENST00000362295 80 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 Y_RNA.99-201ENST00000363138 105 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 RNU4-32P-201ENST00000363404 141 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 RNU6-163P-201ENST00000384396 106 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 FO393413.1-201ENST00000402892 195 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 AC006483.1-201ENST00000487308 313 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 AC108210.2-201ENST00000503681 201 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 RNU6-826P-201ENST00000516827 104 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 AC015712.3-201ENST00000559380 164 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 AC020891.4-201ENST00000605745 93 ntBASIC3.16□□□□□ -1.9
SOBPA7XYQ1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
SOBPA7XYQ1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SOBPA7XYQ1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.15□□□□□ -1.9
SOBPA7XYQ1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
SOBPA7XYQ1 RNA5SP133-201ENST00000363368 119 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 RNU6-480P-201ENST00000384332 107 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 AL606517.2-201ENST00000442855 241 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 RPS29P29-201ENST00000456396 171 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 MIR3134-201ENST00000579433 74 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 MIR3199-1-201ENST00000582434 88 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 SNORA28-201ENST00000606769 126 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 MIR7515-201ENST00000637837 67 ntBASIC3.15□□□□□ -1.91
SOBPA7XYQ1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SOBPA7XYQ1 AC005336.3-201ENST00000623833 2679 ntBASIC3.14□□□□□ -1.91
SOBPA7XYQ1 RNU6-833P-201ENST00000363486 107 ntBASIC3.14□□□□□ -1.91
SOBPA7XYQ1 Y_RNA.164-201ENST00000363709 102 ntBASIC3.14□□□□□ -1.91
SOBPA7XYQ1 Y_RNA.386-201ENST00000383913 105 ntBASIC3.14□□□□□ -1.91
SOBPA7XYQ1 RNU6-447P-201ENST00000410293 104 ntBASIC3.14□□□□□ -1.91
SOBPA7XYQ1 RNU6-1118P-201ENST00000410382 104 ntBASIC3.14□□□□□ -1.91
SOBPA7XYQ1 RNU6-1076P-201ENST00000410397 104 ntBASIC3.14□□□□□ -1.91
SOBPA7XYQ1 RNU6-355P-201ENST00000410427 104 ntBASIC3.14□□□□□ -1.91
SOBPA7XYQ1 RNU6-791P-201ENST00000410467 104 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms