Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC006461.1-201ENST00000412637 326 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 CALM2P4-201ENST00000430810 426 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 SEPT7P4-201ENST00000437076 306 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 AC107027.2-201ENST00000512197 115 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 RNA5SP168-201ENST00000516642 112 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 MIR4299-201ENST00000577899 72 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 MIR4431-201ENST00000579990 94 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 AC008507.4-201ENST00000585464 127 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 AL645939.4-201ENST00000604495 135 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 AC021506.2-201ENST00000612354 169 ntBASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
RAI2Q9Y5P3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 SNORD50B-201ENST00000364995 70 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 RNU6-643P-201ENST00000384018 107 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 RNU6-424P-201ENST00000384367 105 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 U8.16-201ENST00000391279 133 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 MIR891A-201ENST00000401237 79 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 SNRPGP8-201ENST00000454064 226 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 AC114811.1-201ENST00000507207 168 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 AC074198.2-201ENST00000508153 258 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 RNU6-365P-201ENST00000517113 106 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 MIR4713-201ENST00000582691 75 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 AL513423.1-201ENST00000621695 132 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 AC027279.3-201ENST00000625055 122 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 SNORD3E-202ENST00000627253 216 ntBASIC1.63□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.180-201ENST00000363867 113 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 RNU1-42P-201ENST00000364033 160 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 SNORD72-201ENST00000390994 80 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 MIR1267-201ENST00000408723 78 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 PGBD4P5-201ENST00000445958 426 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 RNU6-561P-201ENST00000516222 102 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 RNA5SP153-201ENST00000516498 76 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 RNU6-197P-201ENST00000516680 100 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
RAI2Q9Y5P3 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 MIR548I3-201ENST00000408378 149 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 MIR548I1-201ENST00000408810 149 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 RNU4-43P-201ENST00000410628 137 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 HMGN1P33-201ENST00000432945 451 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 AL157834.3-201ENST00000615543 103 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 AC091895.1-201ENST00000624494 256 ntBASIC1.61□□□□□ -2.15
RAI2Q9Y5P3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 RNU6-484P-201ENST00000384016 107 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 SNORD38C-201ENST00000384381 69 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 MIR660-201ENST00000385235 97 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 RNU6-504P-201ENST00000516568 104 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 SNORA44.1-201ENST00000517031 108 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 AC104465.1-201ENST00000611365 139 ntBASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.6□□□□□ -2.15
RAI2Q9Y5P3 MIRLET7C-201ENST00000362160 84 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 MIR424-201ENST00000362227 98 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.8-201ENST00000362353 102 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 RNU6-833P-201ENST00000363486 107 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 RNU4-84P-201ENST00000364200 139 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.272-201ENST00000364696 102 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 RNU6-239P-201ENST00000390990 99 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 PCNPP3-201ENST00000393579 471 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 JTBP1-201ENST00000441314 247 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 AC099513.1-201ENST00000490423 301 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 AL160236.1-201ENST00000556317 195 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 MIR4778-201ENST00000577635 80 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 MIR378D2-201ENST00000580636 98 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.59□□□□□ -2.15
RAI2Q9Y5P3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 Y_RNA.441-201ENST00000384123 112 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 Y_RNA.464-201ENST00000384282 110 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 MIR452-201ENST00000385020 85 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 RNU6-1135P-201ENST00000411083 103 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 RNU5E-9P-201ENST00000411164 104 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 SNORD116-25-201ENST00000516517 92 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 AC022254.1-201ENST00000567857 235 ntBASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RAI2Q9Y5P3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.57□□□□□ -2.16
RAI2Q9Y5P3 RNU6-60P-201ENST00000364792 103 ntBASIC1.57□□□□□ -2.16
RAI2Q9Y5P3 RNU6-449P-201ENST00000383914 107 ntBASIC1.57□□□□□ -2.16
RAI2Q9Y5P3 SNORD116-18-201ENST00000383961 92 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms