Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MIR4762-201ENST00000585261 75 ntBASIC2.28□□□□□ -2.04
CTDP1Q9Y5B0 U8.5-201ENST00000364528 136 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 Y_RNA.353-201ENST00000365440 108 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-442P-201ENST00000383968 104 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 MIR597-201ENST00000384968 97 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 AL603914.1-201ENST00000401964 204 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 RNU2-60P-201ENST00000517290 128 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 AP000553.5-201ENST00000641933 54 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 ZNF355P-201ENST00000427301 3216 ntBASIC2.27□□□□□ -2.05
CTDP1Q9Y5B0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 Y_RNA.114-201ENST00000363265 113 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-1292P-201ENST00000383856 107 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 SNORD20-201ENST00000384550 80 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 Y_RNA.525-201ENST00000384570 113 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-440P-201ENST00000390882 105 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 MIR891A-201ENST00000401237 79 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 MTATP6P21-201ENST00000440681 189 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 STAG3L5P-204ENST00000443759 179 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 SNORD45.4-201ENST00000516629 73 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 RNU1-40P-201ENST00000516816 164 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 RNU1-97P-201ENST00000516872 164 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 MIR3121-201ENST00000579680 77 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 WWP1P1-201ENST00000466609 2769 ntBASIC2.26□□□□□ -2.05
CTDP1Q9Y5B0 Y_RNA.81-201ENST00000362997 102 ntBASIC2.25□□□□□ -2.05
CTDP1Q9Y5B0 MIR1283-2-201ENST00000408621 87 ntBASIC2.25□□□□□ -2.05
CTDP1Q9Y5B0 AC069257.2-201ENST00000441819 155 ntBASIC2.25□□□□□ -2.05
CTDP1Q9Y5B0 AL158147.1-201ENST00000443970 75 ntBASIC2.25□□□□□ -2.05
CTDP1Q9Y5B0 MIR4713-201ENST00000582691 75 ntBASIC2.25□□□□□ -2.05
CTDP1Q9Y5B0 MIR6845-201ENST00000613182 61 ntBASIC2.25□□□□□ -2.05
CTDP1Q9Y5B0 MIR8054-201ENST00000620877 86 ntBASIC2.25□□□□□ -2.05
CTDP1Q9Y5B0 ICE2P2-201ENST00000483823 2787 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-309P-201ENST00000364573 106 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 MIR548A2-201ENST00000384956 97 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 MIR518F-201ENST00000384973 87 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 MIR548O-201ENST00000408583 114 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 AF228730.3-201ENST00000436691 102 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 HMGN2P23-201ENST00000456759 269 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 Y_RNA.712-201ENST00000517011 92 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 AC133485.4-201ENST00000561835 220 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 AC138907.4-201ENST00000570107 226 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 SNORA28-201ENST00000606769 126 ntBASIC2.24□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-508P-201ENST00000363231 103 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-1056P-201ENST00000383996 107 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 Y_RNA.563-201ENST00000384707 108 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 SNORD77.3-201ENST00000391113 65 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 AC025033.1-201ENST00000463883 194 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-772P-201ENST00000516042 105 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 AC022254.1-201ENST00000567857 235 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 MIR5089-201ENST00000580047 84 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 AL022345.2-201ENST00000606307 135 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 AC006441.5-201ENST00000612680 209 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 MTND5P32-201ENST00000560711 1802 ntBASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-834P-201ENST00000362367 110 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-647P-201ENST00000364243 107 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 Y_RNA.280-201ENST00000364765 112 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-215P-201ENST00000365169 102 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 RN7SKP200-201ENST00000410564 320 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 RNA5SP489-201ENST00000410986 109 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 HMGN2P32-201ENST00000444648 269 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 AL021397.1-201ENST00000451806 248 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 RNU6-1061P-201ENST00000516530 99 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 SNRPGP19-201ENST00000603826 189 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 uc_338.20-201ENST00000621563 178 ntBASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.22□□□□□ -2.05
CTDP1Q9Y5B0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-268P-201ENST00000364174 107 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 RNA5SP160-201ENST00000364866 120 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-163P-201ENST00000384396 106 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 SNORA31.10-201ENST00000516482 106 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 RNU7-25P-201ENST00000516544 62 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-1149P-201ENST00000516810 97 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 AC134878.1-201ENST00000619901 243 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.21□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-1325P-201ENST00000364905 105 ntBASIC2.2□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-950P-201ENST00000384651 107 ntBASIC2.2□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-1064P-201ENST00000410626 104 ntBASIC2.2□□□□□ -2.06
CTDP1Q9Y5B0 RNA5SP458-201ENST00000516188 119 ntBASIC2.2□□□□□ -2.06
CTDP1Q9Y5B0 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
CTDP1Q9Y5B0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.2□□□□□ -2.06
CTDP1Q9Y5B0 MIR3914-2-201ENST00000637339 95 ntBASIC2.2□□□□□ -2.06
CTDP1Q9Y5B0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CTDP1Q9Y5B0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 SNORD115-28-201ENST00000363931 81 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms