Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MAPK10-362ENST00000641864 4484 ntBASIC3.23□□□□□ -1.89
PRDM9Q9NQV7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.23□□□□□ -1.89
PRDM9Q9NQV7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRDM9Q9NQV7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
PRDM9Q9NQV7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 RNU6-461P-201ENST00000364195 107 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 RNU6-1086P-201ENST00000410930 100 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 RNU6-602P-201ENST00000411155 105 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 SPINT5P-201ENST00000448174 155 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 RNU1-98P-201ENST00000458992 160 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 AC114801.3-201ENST00000510231 177 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 SNORD67.1-201ENST00000516618 108 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 IGKV2-26-201ENST00000518305 343 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 MIR548AR-201ENST00000582191 57 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 MIR8065-201ENST00000620577 100 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 MAPK10-266ENST00000641066 6555 ntBASIC3.22□□□□□ -1.89
PRDM9Q9NQV7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
PRDM9Q9NQV7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PRDM9Q9NQV7 SNORD46.1-201ENST00000364139 104 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 RNU1-33P-201ENST00000364249 162 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 RNU6-1031P-201ENST00000384773 107 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 SNORD28B-201ENST00000390993 75 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 RNU6-129P-201ENST00000391022 107 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 PRSS3P4-201ENST00000453323 162 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 AC234781.5-201ENST00000508429 271 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 RPL12P50-201ENST00000603116 116 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 MIR8055-201ENST00000610739 97 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 MIR7975-201ENST00000619350 68 ntBASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.21□□□□□ -1.9
PRDM9Q9NQV7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 SNORA11.1-201ENST00000408133 129 ntBASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 RNU7-48P-201ENST00000458875 63 ntBASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 RPS27P29-201ENST00000463110 252 ntBASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 RNU7-137P-201ENST00000516788 62 ntBASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 FAM106DP-201ENST00000586416 501 ntBASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 AC012676.2-201ENST00000619258 186 ntBASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRDM9Q9NQV7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 SNORA63.1-201ENST00000362493 131 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 Y_RNA.98-201ENST00000363109 102 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 Y_RNA.168-201ENST00000363740 102 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 RNU6-1321P-201ENST00000390905 107 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 MIR1236-201ENST00000408340 102 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 HMGN1P33-201ENST00000432945 451 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 AL513423.1-201ENST00000621695 132 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 AP001362.1-201ENST00000625165 124 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 Z97988.1-201ENST00000637697 135 ntBASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PRDM9Q9NQV7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PRDM9Q9NQV7 AC005336.3-201ENST00000623833 2679 ntBASIC3.18□□□□□ -1.9
PRDM9Q9NQV7 MIR208A-201ENST00000362287 71 ntBASIC3.18□□□□□ -1.9
PRDM9Q9NQV7 RNU6-1094P-201ENST00000362416 104 ntBASIC3.18□□□□□ -1.9
PRDM9Q9NQV7 MIR181B2-201ENST00000385004 89 ntBASIC3.18□□□□□ -1.9
PRDM9Q9NQV7 MIR34B-201ENST00000385076 84 ntBASIC3.18□□□□□ -1.9
PRDM9Q9NQV7 RNU6-519P-201ENST00000410590 108 ntBASIC3.18□□□□□ -1.9
PRDM9Q9NQV7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.18□□□□□ -1.9
PRDM9Q9NQV7 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 RNA5SP133-201ENST00000363368 119 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 RNA5SP138-201ENST00000365098 114 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 RNU1-109P-201ENST00000383960 147 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 AC093850.1-201ENST00000454121 251 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 RNU7-79P-201ENST00000516082 62 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 MIR5094-201ENST00000578766 85 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 MIR4276-201ENST00000584832 70 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 SNORD14A-201ENST00000606526 91 ntBASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PRDM9Q9NQV7 HSBP1P2-201ENST00000299671 229 ntBASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 RNA5SP293-201ENST00000410527 113 ntBASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 RPL23AP83-201ENST00000434984 473 ntBASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 MTND5P40-201ENST00000559945 246 ntBASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 AC020891.4-201ENST00000605745 93 ntBASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PRDM9Q9NQV7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms