Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SNORA5A-201ENST00000384111 134 ntBASIC3.57□□□□□ -1.84
RTN4Q9NQC3 RNU6-913P-201ENST00000390913 95 ntBASIC3.57□□□□□ -1.84
RTN4Q9NQC3 SNORA26.6-201ENST00000391256 115 ntBASIC3.57□□□□□ -1.84
RTN4Q9NQC3 AC063976.4-201ENST00000421971 163 ntBASIC3.57□□□□□ -1.84
RTN4Q9NQC3 HMGN2P19-201ENST00000425149 265 ntBASIC3.57□□□□□ -1.84
RTN4Q9NQC3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTN4Q9NQC3 RPS29P6-201ENST00000438196 145 ntBASIC3.57□□□□□ -1.84
RTN4Q9NQC3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.57□□□□□ -1.84
RTN4Q9NQC3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.57□□□□□ -1.84
RTN4Q9NQC3 SNORD115-2-201ENST00000362842 82 ntBASIC3.56□□□□□ -1.84
RTN4Q9NQC3 SNORD115-20-201ENST00000365099 82 ntBASIC3.56□□□□□ -1.84
RTN4Q9NQC3 RNU6-44P-201ENST00000384045 107 ntBASIC3.56□□□□□ -1.84
RTN4Q9NQC3 SNORA67.3-201ENST00000384366 140 ntBASIC3.56□□□□□ -1.84
RTN4Q9NQC3 AC113410.1-201ENST00000505029 247 ntBASIC3.56□□□□□ -1.84
RTN4Q9NQC3 MIR5694-201ENST00000581190 76 ntBASIC3.56□□□□□ -1.84
RTN4Q9NQC3 MIR8055-201ENST00000610739 97 ntBASIC3.56□□□□□ -1.84
RTN4Q9NQC3 Z97988.1-201ENST00000637697 135 ntBASIC3.56□□□□□ -1.84
RTN4Q9NQC3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTN4Q9NQC3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RTN4Q9NQC3 AL596028.1-201ENST00000326971 197 ntBASIC3.55□□□□□ -1.84
RTN4Q9NQC3 SNORD41-201ENST00000386967 70 ntBASIC3.55□□□□□ -1.84
RTN4Q9NQC3 MIR670-201ENST00000390142 98 ntBASIC3.55□□□□□ -1.84
RTN4Q9NQC3 HMGN2P23-201ENST00000456759 269 ntBASIC3.55□□□□□ -1.84
RTN4Q9NQC3 SCARNA13-201ENST00000516672 275 ntBASIC3.55□□□□□ -1.84
RTN4Q9NQC3 RNU6-826P-201ENST00000516827 104 ntBASIC3.55□□□□□ -1.84
RTN4Q9NQC3 IGKV3-31-201ENST00000523109 329 ntBASIC3.55□□□□□ -1.84
RTN4Q9NQC3 AL359851.1-201ENST00000569460 4997 ntBASIC3.55□□□□□ -1.84
RTN4Q9NQC3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4Q9NQC3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4Q9NQC3 RNU7-45P-201ENST00000459460 63 ntBASIC3.54□□□□□ -1.84
RTN4Q9NQC3 RPS23P4-201ENST00000487908 423 ntBASIC3.54□□□□□ -1.84
RTN4Q9NQC3 SNORA31.4-201ENST00000516049 129 ntBASIC3.54□□□□□ -1.84
RTN4Q9NQC3 MIR3158-1-201ENST00000583596 81 ntBASIC3.54□□□□□ -1.84
RTN4Q9NQC3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4Q9NQC3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN4Q9NQC3 RNU6-755P-201ENST00000364400 103 ntBASIC3.53□□□□□ -1.84
RTN4Q9NQC3 SNORD77B-201ENST00000391112 67 ntBASIC3.53□□□□□ -1.84
RTN4Q9NQC3 MIR514B-201ENST00000516774 80 ntBASIC3.53□□□□□ -1.84
RTN4Q9NQC3 AC107016.2-201ENST00000547968 190 ntBASIC3.53□□□□□ -1.84
RTN4Q9NQC3 AC008739.3-201ENST00000603262 127 ntBASIC3.53□□□□□ -1.84
RTN4Q9NQC3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4Q9NQC3 RN7SKP132-201ENST00000516001 208 ntBASIC3.52□□□□□ -1.85
RTN4Q9NQC3 SNORA67.7-201ENST00000516664 135 ntBASIC3.52□□□□□ -1.85
RTN4Q9NQC3 MIR4429-201ENST00000580105 73 ntBASIC3.52□□□□□ -1.85
RTN4Q9NQC3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RTN4Q9NQC3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTN4Q9NQC3 SNORA22-201ENST00000383907 134 ntBASIC3.51□□□□□ -1.85
RTN4Q9NQC3 SNORD12C-201ENST00000386307 89 ntBASIC3.51□□□□□ -1.85
RTN4Q9NQC3 RNU4-69P-201ENST00000410677 143 ntBASIC3.51□□□□□ -1.85
RTN4Q9NQC3 RPL23AP42-201ENST00000471152 471 ntBASIC3.51□□□□□ -1.85
RTN4Q9NQC3 MIR5004-201ENST00000579078 107 ntBASIC3.51□□□□□ -1.85
RTN4Q9NQC3 MIR2682-201ENST00000580305 110 ntBASIC3.51□□□□□ -1.85
RTN4Q9NQC3 MIR5195-201ENST00000583555 115 ntBASIC3.51□□□□□ -1.85
RTN4Q9NQC3 MIR3922-201ENST00000585192 84 ntBASIC3.51□□□□□ -1.85
RTN4Q9NQC3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTN4Q9NQC3 SNORD38B-201ENST00000384690 67 ntBASIC3.5□□□□□ -1.85
RTN4Q9NQC3 MIR548D2-201ENST00000384955 97 ntBASIC3.5□□□□□ -1.85
RTN4Q9NQC3 RNA5SP489-201ENST00000410986 109 ntBASIC3.5□□□□□ -1.85
RTN4Q9NQC3 RPL39P34-201ENST00000477141 156 ntBASIC3.5□□□□□ -1.85
RTN4Q9NQC3 PDCD5P2-201ENST00000507570 312 ntBASIC3.5□□□□□ -1.85
RTN4Q9NQC3 AC008834.1-201ENST00000511612 175 ntBASIC3.5□□□□□ -1.85
RTN4Q9NQC3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN4Q9NQC3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.5□□□□□ -1.85
RTN4Q9NQC3 SNORD38B-202ENST00000625943 69 ntBASIC3.5□□□□□ -1.85
RTN4Q9NQC3 MIR302D-201ENST00000362275 68 ntBASIC3.49□□□□□ -1.85
RTN4Q9NQC3 AL512326.2-201ENST00000426359 151 ntBASIC3.49□□□□□ -1.85
RTN4Q9NQC3 RNU7-41P-201ENST00000515917 61 ntBASIC3.49□□□□□ -1.85
RTN4Q9NQC3 MIR4276-201ENST00000584832 70 ntBASIC3.49□□□□□ -1.85
RTN4Q9NQC3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.49□□□□□ -1.85
RTN4Q9NQC3 Y_RNA.85-201ENST00000363014 111 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 SNORD1A-201ENST00000364968 72 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 MIR218-2-201ENST00000385006 110 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RTN4Q9NQC3 RNA5SP33-201ENST00000516687 98 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 RNU7-6P-201ENST00000516845 62 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 MIR3937-201ENST00000580135 106 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 MIR4422-201ENST00000581938 83 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 AC103810.6-201ENST00000606708 136 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 AC067747.1-201ENST00000608026 250 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 AC039056.2-201ENST00000622261 511 ntBASIC3.48□□□□□ -1.85
RTN4Q9NQC3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
RTN4Q9NQC3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RTN4Q9NQC3 Y_RNA.309-201ENST00000365046 111 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 MIR7-3-201ENST00000384898 110 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 MIR449B-201ENST00000384995 97 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 RNA5SP210-201ENST00000391034 120 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 RNA5SP120-201ENST00000410900 112 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 MIR3670-2-201ENST00000582974 65 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 MIR3670-1-201ENST00000584160 65 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 MIR3670-3-201ENST00000584855 65 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 MIR3670-4-201ENST00000612260 65 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 MIR6075-201ENST00000620782 95 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.47□□□□□ -1.85
RTN4Q9NQC3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.47□□□□□ -1.85
RTN4Q9NQC3 Y_RNA.362-201ENST00000365518 110 ntBASIC3.46□□□□□ -1.86
RTN4Q9NQC3 RPS29P4-201ENST00000414733 161 ntBASIC3.46□□□□□ -1.86
RTN4Q9NQC3 AC026403.1-201ENST00000518938 295 ntBASIC3.46□□□□□ -1.86
RTN4Q9NQC3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTN4Q9NQC3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTN4Q9NQC3 AC245047.7-201ENST00000440265 293 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms