Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 Y_RNA.818-201ENST00000618813 71 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 Y_RNA.78-201ENST00000362970 110 ntBASIC2.65□□□□□ -1.99
BHLHE41Q9C0J9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
BHLHE41Q9C0J9 AL135938.1-201ENST00000443141 297 ntBASIC2.65□□□□□ -1.99
BHLHE41Q9C0J9 RNU7-67P-201ENST00000459003 62 ntBASIC2.65□□□□□ -1.99
BHLHE41Q9C0J9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.65□□□□□ -1.99
BHLHE41Q9C0J9 RNA5SP437-201ENST00000517249 129 ntBASIC2.65□□□□□ -1.99
BHLHE41Q9C0J9 AC004812.1-201ENST00000540773 146 ntBASIC2.65□□□□□ -1.99
BHLHE41Q9C0J9 AL137790.1-201ENST00000634283 177 ntBASIC2.65□□□□□ -1.99
BHLHE41Q9C0J9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-294P-201ENST00000364999 102 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 Y_RNA.507-201ENST00000384500 99 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 SNORA44-201ENST00000384584 132 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 HMGN2P39-201ENST00000398005 273 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 RN7SKP192-201ENST00000411291 327 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 RNA5SP270-201ENST00000411361 118 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 AL512326.2-201ENST00000426359 151 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-893P-201ENST00000458841 100 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 RPS23P4-201ENST00000487908 423 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 RNU7-53P-201ENST00000516705 60 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 RNA5SP481-201ENST00000516814 122 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 AL513534.2-201ENST00000603836 250 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 AC092881.1-201ENST00000638218 2733 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
BHLHE41Q9C0J9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 RNU4-36P-201ENST00000364294 144 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 Y_RNA.531-201ENST00000384589 121 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 MIR1302-4-201ENST00000408701 150 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 RNA5SP501-201ENST00000410990 112 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 RNU7-113P-201ENST00000459273 62 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 snoU13.27-201ENST00000459278 104 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 RNU7-45P-201ENST00000459460 63 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-958P-201ENST00000516995 106 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 MIR3152-201ENST00000579801 74 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 AL442644.1-201ENST00000454390 3105 ntBASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.63□□□□□ -1.99
BHLHE41Q9C0J9 Y_RNA.299-201ENST00000364973 94 ntBASIC2.62□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-904P-201ENST00000516206 101 ntBASIC2.62□□□□□ -1.99
BHLHE41Q9C0J9 SUB1P4-201ENST00000566062 339 ntBASIC2.62□□□□□ -1.99
BHLHE41Q9C0J9 AC021506.2-201ENST00000612354 169 ntBASIC2.62□□□□□ -1.99
BHLHE41Q9C0J9 AL513423.1-201ENST00000621695 132 ntBASIC2.62□□□□□ -1.99
BHLHE41Q9C0J9 MIR6733-201ENST00000635723 61 ntBASIC2.62□□□□□ -1.99
BHLHE41Q9C0J9 MIR2052-201ENST00000636055 55 ntBASIC2.62□□□□□ -1.99
BHLHE41Q9C0J9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-112P-201ENST00000363599 104 ntBASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 RPS29P29-201ENST00000456396 171 ntBASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 SNORA31.4-201ENST00000516049 129 ntBASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 DEFB131E-201ENST00000532329 154 ntBASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 AC006023.1-201ENST00000603944 259 ntBASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 FAM71BP1-201ENST00000604431 523 ntBASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 SNORD3E-202ENST00000627253 216 ntBASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
BHLHE41Q9C0J9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-661P-201ENST00000362409 107 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 Y_RNA.155-201ENST00000363632 101 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 MIR660-201ENST00000385235 97 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-747P-201ENST00000390928 104 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-241P-201ENST00000391148 104 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 RNA5SP261-201ENST00000410536 106 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-177P-201ENST00000411257 104 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 POLR2J4-204ENST00000418424 324 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 PGBD4P5-201ENST00000445958 426 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 AC113410.1-201ENST00000505029 247 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 RPL12P50-201ENST00000603116 116 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 AC087741.2-201ENST00000619415 172 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 MIR203B-201ENST00000636080 86 ntBASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
BHLHE41Q9C0J9 MAPK10-266ENST00000641066 6555 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 Y_RNA.107-201ENST00000363190 121 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 Y_RNA.220-201ENST00000364244 109 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 RNU1-51P-201ENST00000365345 176 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 RNU6-49P-201ENST00000384256 107 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 Y_RNA.558-201ENST00000384685 113 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 AL139132.1-201ENST00000431587 344 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 AC105272.1-201ENST00000438604 198 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 U1.36-201ENST00000620684 176 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 AC095038.3-201ENST00000634439 195 ntBASIC2.59□□□□□ -1.99
BHLHE41Q9C0J9 SNORA22.1-201ENST00000362701 134 ntBASIC2.58□□□□□ -2
BHLHE41Q9C0J9 Y_RNA.171-201ENST00000363760 102 ntBASIC2.58□□□□□ -2
BHLHE41Q9C0J9 SNORD73B-201ENST00000364394 72 ntBASIC2.58□□□□□ -2
BHLHE41Q9C0J9 RNU6-296P-201ENST00000384608 107 ntBASIC2.58□□□□□ -2
BHLHE41Q9C0J9 SNORD77B-201ENST00000391112 67 ntBASIC2.58□□□□□ -2
BHLHE41Q9C0J9 RNU4-69P-201ENST00000410677 143 ntBASIC2.58□□□□□ -2
BHLHE41Q9C0J9 MTATP8P2-201ENST00000435212 202 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms