Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MIR569-201ENST00000385228 96 ntBASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 RNU6-588P-201ENST00000410281 105 ntBASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 AL591806.2-201ENST00000433122 173 ntBASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 RNU1-40P-201ENST00000516816 164 ntBASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 RNU1-97P-201ENST00000516872 164 ntBASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TRIM55Q9BYV6 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 Y_RNA.37-201ENST00000362606 108 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 RNY1P11-201ENST00000363759 113 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 SNORA2.2-201ENST00000365473 135 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 SNORD77.3-201ENST00000391113 65 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 RNA5SP127-201ENST00000411051 133 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 AL021397.1-201ENST00000451806 248 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 snoU13.9-201ENST00000458927 103 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 SNORA18.4-201ENST00000516440 124 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 AC112693.2-201ENST00000556538 232 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 MIR548X2-201ENST00000579776 100 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 MIR8063-201ENST00000621930 81 ntBASIC2.19□□□□□ -2.06
TRIM55Q9BYV6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 RNU6-1292P-201ENST00000383856 107 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 Y_RNA.568-201ENST00000384742 113 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 MIR624-201ENST00000385217 97 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 MIR653-201ENST00000385279 96 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 MIR513C-201ENST00000401352 84 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 RNU2-40P-201ENST00000410833 196 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 AC025033.1-201ENST00000463883 194 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 AC015712.3-201ENST00000559380 164 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
TRIM55Q9BYV6 MIR302D-201ENST00000362275 68 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 SNORD114-1-201ENST00000362705 72 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 RNA5SP138-201ENST00000365098 114 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 Y_RNA.410-201ENST00000383992 113 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 RNU6-257P-201ENST00000410238 98 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 RNU6-938P-201ENST00000411285 103 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 AC087499.4-201ENST00000448505 178 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 HSPE1P24-201ENST00000450782 238 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 SNORD36C-201ENST00000516733 66 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 MIR514B-201ENST00000516774 80 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 SNORA18.7-201ENST00000516910 131 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 AC090049.2-201ENST00000550377 109 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 MIR3198-2-201ENST00000577868 80 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 MIR6873-201ENST00000622788 63 ntBASIC2.17□□□□□ -2.06
TRIM55Q9BYV6 SNORD50.2-201ENST00000365465 70 ntBASIC2.16□□□□□ -2.06
TRIM55Q9BYV6 U8.17-201ENST00000391292 132 ntBASIC2.16□□□□□ -2.06
TRIM55Q9BYV6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM55Q9BYV6 SNORD123-201ENST00000459473 70 ntBASIC2.16□□□□□ -2.06
TRIM55Q9BYV6 AC108210.2-201ENST00000503681 201 ntBASIC2.16□□□□□ -2.06
TRIM55Q9BYV6 RNU6-322P-201ENST00000516010 103 ntBASIC2.16□□□□□ -2.06
TRIM55Q9BYV6 RNU7-181P-201ENST00000517234 74 ntBASIC2.16□□□□□ -2.06
TRIM55Q9BYV6 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
TRIM55Q9BYV6 RNU6-1189P-201ENST00000383958 107 ntBASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 RNU6-460P-201ENST00000391158 108 ntBASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 AP003484.1-201ENST00000530974 250 ntBASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 MIR5197-201ENST00000583721 112 ntBASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 MIR376A2-201ENST00000636782 80 ntBASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.586-201ENST00000391146 98 ntBASIC2.14□□□□□ -2.07
TRIM55Q9BYV6 AL451046.2-201ENST00000403074 277 ntBASIC2.14□□□□□ -2.07
TRIM55Q9BYV6 RNU7-197P-201ENST00000458836 62 ntBASIC2.14□□□□□ -2.07
TRIM55Q9BYV6 SNORA74.3-201ENST00000517108 154 ntBASIC2.14□□□□□ -2.07
TRIM55Q9BYV6 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
TRIM55Q9BYV6 AC010332.2-201ENST00000613083 1904 ntBASIC2.14□□□□□ -2.07
TRIM55Q9BYV6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM55Q9BYV6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 RNA5SP99-201ENST00000364020 114 ntBASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.420-201ENST00000384043 110 ntBASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 AC008834.1-201ENST00000511612 175 ntBASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 RNU6-922P-201ENST00000516753 99 ntBASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 AC131055.1-201ENST00000584626 316 ntBASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.241-201ENST00000364470 117 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.251-201ENST00000364551 99 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 SNORD1A-201ENST00000364968 72 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 SNORA64-201ENST00000384674 134 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 SNORD41-201ENST00000386967 70 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 RNA5SP489-201ENST00000410986 109 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 MTND4LP9-201ENST00000427694 174 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 RNU6-1211P-201ENST00000459179 105 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 RNU6-971P-201ENST00000516920 106 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 AC019176.1-201ENST00000518519 225 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 AL513534.2-201ENST00000603836 250 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 WWP1P1-201ENST00000466609 2769 ntBASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM55Q9BYV6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
TRIM55Q9BYV6 Y_RNA.52-201ENST00000362760 96 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms