Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 SNORA25.15-201ENST00000516487 89 ntBASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.692-201ENST00000516627 105 ntBASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 RNU6-250P-201ENST00000516958 103 ntBASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 RNU6-1270P-201ENST00000517128 108 ntBASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 AC090049.2-201ENST00000550377 109 ntBASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 AC006441.5-201ENST00000612680 209 ntBASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SH2D3AQ9BRG2 AC008555.8-201ENST00000623602 2168 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 MIR126-201ENST00000362291 85 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.52-201ENST00000362760 96 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 SNORD20-201ENST00000384550 80 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 RNA5SP109-201ENST00000391010 116 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 RNU11-3P-201ENST00000391111 133 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.757-201ENST00000578934 114 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 AL359881.1-201ENST00000602916 267 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 MIR3914-2-201ENST00000637339 95 ntBASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SH2D3AQ9BRG2 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 RNA5SP190-201ENST00000365222 118 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 MIR518F-201ENST00000384973 87 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 MIRLET7F2-201ENST00000385277 83 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 RNA5SP465-201ENST00000391195 109 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 RNA5SP270-201ENST00000411361 118 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.666-201ENST00000516187 112 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 RNU7-28P-201ENST00000516759 62 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 MIR3129-201ENST00000581095 76 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 AC069114.2-201ENST00000604699 304 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.93□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.114-201ENST00000363265 113 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 SNORD77.3-201ENST00000391113 65 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 RNA5SP482-201ENST00000391269 118 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 SNRPGP13-201ENST00000442212 177 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 SCARNA15-202ENST00000516881 127 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.714-201ENST00000517065 90 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 RNU6-1116P-201ENST00000517269 99 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 MIR5094-201ENST00000578766 85 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 MIR376A2-201ENST00000636782 80 ntBASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SH2D3AQ9BRG2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 MIRLET7C-201ENST00000362160 84 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 SNORD68-201ENST00000363214 84 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 SNORA63D-201ENST00000364359 132 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 RNU6-309P-201ENST00000364573 106 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 SNORA40.5-201ENST00000391061 128 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.630-201ENST00000411370 108 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 Y_RNA.651-201ENST00000459380 103 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 AC055731.1-201ENST00000474387 401 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 RNVU1-2-201ENST00000516326 135 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 AC084364.2-201ENST00000546924 395 ntBASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SH2D3AQ9BRG2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SH2D3AQ9BRG2 RNU6-44P-201ENST00000384045 107 ntBASIC1.9□□□□□ -2.11
SH2D3AQ9BRG2 RNA5SP247-201ENST00000411181 105 ntBASIC1.9□□□□□ -2.11
SH2D3AQ9BRG2 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
SH2D3AQ9BRG2 AC245047.3-201ENST00000429428 127 ntBASIC1.9□□□□□ -2.11
SH2D3AQ9BRG2 SNORA18.4-201ENST00000516440 124 ntBASIC1.9□□□□□ -2.11
SH2D3AQ9BRG2 SNORA31.10-201ENST00000516482 106 ntBASIC1.9□□□□□ -2.11
SH2D3AQ9BRG2 Y_RNA.690-201ENST00000516603 95 ntBASIC1.9□□□□□ -2.11
SH2D3AQ9BRG2 MIR8054-201ENST00000620877 86 ntBASIC1.9□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-268P-201ENST00000364174 107 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 Y_RNA.336-201ENST00000365307 109 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 SNORA48.1-201ENST00000390879 135 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 AF228730.3-201ENST00000436691 102 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 HSPE1P9-201ENST00000440046 311 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-772P-201ENST00000516042 105 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-693P-201ENST00000516134 107 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-919P-201ENST00000516731 104 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 SNORA31.25-201ENST00000517242 134 ntBASIC1.89□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-457P-201ENST00000363999 107 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-647P-201ENST00000364243 107 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-1325P-201ENST00000364905 105 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 SNORA4.2-201ENST00000365313 147 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 Y_RNA.410-201ENST00000383992 113 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-1144P-201ENST00000384247 104 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 RNA5SP501-201ENST00000410990 112 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 SUB1P4-201ENST00000566062 339 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms