Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AL365361.1-201ENST00000566942 3481 ntBASIC2.9□□□□□ -1.94
IFT43Q96FT9 RNU6-661P-201ENST00000362409 107 ntBASIC2.9□□□□□ -1.95
IFT43Q96FT9 AC107297.1-201ENST00000459991 176 ntBASIC2.9□□□□□ -1.95
IFT43Q96FT9 SCARNA23-201ENST00000516060 130 ntBASIC2.9□□□□□ -1.95
IFT43Q96FT9 RNU6-826P-201ENST00000516827 104 ntBASIC2.9□□□□□ -1.95
IFT43Q96FT9 IGLV3-17-201ENST00000519099 244 ntBASIC2.9□□□□□ -1.95
IFT43Q96FT9 AC004812.1-201ENST00000540773 146 ntBASIC2.9□□□□□ -1.95
IFT43Q96FT9 FAM71BP1-201ENST00000604431 523 ntBASIC2.9□□□□□ -1.95
IFT43Q96FT9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.9□□□□□ -1.95
IFT43Q96FT9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
IFT43Q96FT9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
IFT43Q96FT9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.89□□□□□ -1.95
IFT43Q96FT9 Y_RNA.10-201ENST00000362371 110 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 MIR1283-2-201ENST00000408621 87 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 MIR1267-201ENST00000408723 78 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 RPS23P4-201ENST00000487908 423 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 RNU7-12P-201ENST00000516030 62 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 RNU6-56P-201ENST00000516986 93 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 AC007336.1-201ENST00000576365 3828 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 MIR3670-2-201ENST00000582974 65 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 MIR3670-1-201ENST00000584160 65 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 MIR4298-201ENST00000584380 73 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 MIR3670-3-201ENST00000584855 65 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 ZNF861P-201ENST00000588126 639 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 MIR3670-4-201ENST00000612260 65 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 AC087741.2-201ENST00000619415 172 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 AC021613.1-201ENST00000623880 111 ntBASIC2.89□□□□□ -1.95
IFT43Q96FT9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.89□□□□□ -1.95
IFT43Q96FT9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
IFT43Q96FT9 RNY3P2-201ENST00000362918 102 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 Y_RNA.299-201ENST00000364973 94 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 SNORA4.2-201ENST00000365313 147 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 RNU6-820P-201ENST00000384273 107 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 Y_RNA.531-201ENST00000384589 121 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 RNA5SP465-201ENST00000391195 109 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 Y_RNA.601-201ENST00000410500 113 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 HMGN2P3-201ENST00000433603 273 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.88□□□□□ -1.95
IFT43Q96FT9 HMGN2P5-201ENST00000436882 273 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 RNU6-893P-201ENST00000458841 100 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 RNU7-181P-201ENST00000517234 74 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 AC090821.2-201ENST00000523552 176 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 AC062037.1-201ENST00000605302 128 ntBASIC2.88□□□□□ -1.95
IFT43Q96FT9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
IFT43Q96FT9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
IFT43Q96FT9 SNORD115-19-201ENST00000363098 82 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 SNORD115-18-201ENST00000363293 82 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 RNU6-1099P-201ENST00000363533 107 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 SNORD56.5-201ENST00000364281 72 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 SNORD115-17-201ENST00000364612 82 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 Y_RNA.466-201ENST00000384294 113 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 MIR518A2-201ENST00000384966 87 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 MIR450A2-201ENST00000385022 100 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 RNA5SP184-201ENST00000411071 108 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 AL512326.2-201ENST00000426359 151 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 AC113410.1-201ENST00000505029 247 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 RNVU1-2-201ENST00000516326 135 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 AC010297.1-201ENST00000623948 149 ntBASIC2.87□□□□□ -1.95
IFT43Q96FT9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.87□□□□□ -1.95
IFT43Q96FT9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
IFT43Q96FT9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
IFT43Q96FT9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
IFT43Q96FT9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.86□□□□□ -1.95
IFT43Q96FT9 SNORA1.2-201ENST00000365189 134 ntBASIC2.86□□□□□ -1.95
IFT43Q96FT9 Y_RNA.342-201ENST00000365352 113 ntBASIC2.86□□□□□ -1.95
IFT43Q96FT9 RNU2-11P-201ENST00000459191 187 ntBASIC2.86□□□□□ -1.95
IFT43Q96FT9 UBL5P3-201ENST00000475112 231 ntBASIC2.86□□□□□ -1.95
IFT43Q96FT9 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.86□□□□□ -1.95
IFT43Q96FT9 MIR3618-201ENST00000580330 88 ntBASIC2.86□□□□□ -1.95
IFT43Q96FT9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
IFT43Q96FT9 RNU6-363P-201ENST00000362895 105 ntBASIC2.85□□□□□ -1.95
IFT43Q96FT9 MIR520A-201ENST00000384862 85 ntBASIC2.85□□□□□ -1.95
IFT43Q96FT9 RNU2-7P-201ENST00000410794 178 ntBASIC2.85□□□□□ -1.95
IFT43Q96FT9 AC087499.2-201ENST00000432861 149 ntBASIC2.85□□□□□ -1.95
IFT43Q96FT9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
IFT43Q96FT9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.85□□□□□ -1.95
IFT43Q96FT9 SNORA31.4-201ENST00000516049 129 ntBASIC2.85□□□□□ -1.95
IFT43Q96FT9 MIR3152-201ENST00000579801 74 ntBASIC2.85□□□□□ -1.95
IFT43Q96FT9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
IFT43Q96FT9 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
IFT43Q96FT9 AC092881.1-201ENST00000638218 2733 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
IFT43Q96FT9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 Y_RNA.155-201ENST00000363632 101 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 MIR452-201ENST00000385020 85 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 MIR9-1-201ENST00000385198 89 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 SNORA48.1-201ENST00000390879 135 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 RNU6-733P-201ENST00000410759 104 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 POLR2J4-204ENST00000418424 324 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 PGBD4P5-201ENST00000445958 426 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 RN7SKP12-201ENST00000516275 143 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 AC026421.1-201ENST00000519101 163 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 AP003327.1-201ENST00000529684 127 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 SUB1P4-201ENST00000566062 339 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 MIR4694-201ENST00000578534 80 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 MIR203B-201ENST00000636080 86 ntBASIC2.84□□□□□ -1.95
IFT43Q96FT9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms