Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC019176.1-201ENST00000518519 225 ntBASIC2.08□□□□□ -2.08
CCDC144BQ3MJ40 MIR4285-201ENST00000581001 85 ntBASIC2.08□□□□□ -2.08
CCDC144BQ3MJ40 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCDC144BQ3MJ40 AL121890.5-201ENST00000620848 304 ntBASIC2.08□□□□□ -2.08
CCDC144BQ3MJ40 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC144BQ3MJ40 Y_RNA.23-201ENST00000362496 106 ntBASIC2.07□□□□□ -2.08
CCDC144BQ3MJ40 MIR548O-201ENST00000408583 114 ntBASIC2.07□□□□□ -2.08
CCDC144BQ3MJ40 RPL31P63-201ENST00000422565 375 ntBASIC2.07□□□□□ -2.08
CCDC144BQ3MJ40 AC107393.1-201ENST00000512403 346 ntBASIC2.07□□□□□ -2.08
CCDC144BQ3MJ40 Y_RNA.666-201ENST00000516187 112 ntBASIC2.07□□□□□ -2.08
CCDC144BQ3MJ40 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC144BQ3MJ40 AC015726.2-201ENST00000620112 122 ntBASIC2.07□□□□□ -2.08
CCDC144BQ3MJ40 MIR378A-201ENST00000362177 66 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 RNU6-888P-201ENST00000363010 101 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 SNORA1.2-201ENST00000365189 134 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 Y_RNA.412-201ENST00000384001 104 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 RNU6-1067P-201ENST00000384752 107 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 RNU6-693P-201ENST00000516134 107 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 RNU6-922P-201ENST00000516753 99 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 SNORA74.3-201ENST00000517108 154 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 AC004792.1-201ENST00000614523 137 ntBASIC2.06□□□□□ -2.08
CCDC144BQ3MJ40 SNORA16.1-201ENST00000364597 132 ntBASIC2.05□□□□□ -2.08
CCDC144BQ3MJ40 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC144BQ3MJ40 RNU6-561P-201ENST00000516222 102 ntBASIC2.05□□□□□ -2.08
CCDC144BQ3MJ40 MIR4431-201ENST00000579990 94 ntBASIC2.05□□□□□ -2.08
CCDC144BQ3MJ40 MIR3668-201ENST00000582138 75 ntBASIC2.05□□□□□ -2.08
CCDC144BQ3MJ40 snoU13.31-201ENST00000607291 104 ntBASIC2.05□□□□□ -2.08
CCDC144BQ3MJ40 U6.106-201ENST00000636360 105 ntBASIC2.05□□□□□ -2.08
CCDC144BQ3MJ40 Y_RNA.547-201ENST00000384654 119 ntBASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 BTF3P4-201ENST00000418852 495 ntBASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 AC087499.4-201ENST00000448505 178 ntBASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 RPL39P39-201ENST00000455840 151 ntBASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 AC005840.1-201ENST00000498412 377 ntBASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 RNU7-43P-201ENST00000516554 64 ntBASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 AC024614.2-201ENST00000577584 372 ntBASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC144BQ3MJ40 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 Y_RNA.91-201ENST00000363042 107 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 SNORD115-28-201ENST00000363931 81 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 RNU6-643P-201ENST00000384018 107 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 SNORD61-201ENST00000384252 73 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 SNORD123-201ENST00000459473 70 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 RNU7-25P-201ENST00000516544 62 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 MIR4419B-201ENST00000577260 68 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 MIR3664-201ENST00000579074 99 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 MIR378D2-201ENST00000580636 98 ntBASIC2.03□□□□□ -2.08
CCDC144BQ3MJ40 Y_RNA.66-201ENST00000362862 102 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 Y_RNA.240-201ENST00000364469 95 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 U8.17-201ENST00000391292 132 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 Y_RNA.662-201ENST00000516028 97 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 RNU6-1219P-201ENST00000516143 112 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 SNORD116-25-201ENST00000516517 92 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 SNORA18.7-201ENST00000516910 131 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 MIR4781-201ENST00000585250 76 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 AC134878.1-201ENST00000619901 243 ntBASIC2.02□□□□□ -2.09
CCDC144BQ3MJ40 Y_RNA.357-201ENST00000365487 109 ntBASIC2.01□□□□□ -2.09
CCDC144BQ3MJ40 SNORD41-201ENST00000386967 70 ntBASIC2.01□□□□□ -2.09
CCDC144BQ3MJ40 RNU4-62P-201ENST00000410125 130 ntBASIC2.01□□□□□ -2.09
CCDC144BQ3MJ40 RPS27P16-201ENST00000425758 201 ntBASIC2.01□□□□□ -2.09
CCDC144BQ3MJ40 AC107297.1-201ENST00000459991 176 ntBASIC2.01□□□□□ -2.09
CCDC144BQ3MJ40 AC022559.1-201ENST00000520905 205 ntBASIC2.01□□□□□ -2.09
CCDC144BQ3MJ40 AL512310.8-201ENST00000550183 120 ntBASIC2.01□□□□□ -2.09
CCDC144BQ3MJ40 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC144BQ3MJ40 AC107027.2-201ENST00000512197 115 ntBASIC2□□□□□ -2.09
CCDC144BQ3MJ40 RNU4-57P-201ENST00000515980 135 ntBASIC2□□□□□ -2.09
CCDC144BQ3MJ40 Y_RNA.410-201ENST00000383992 113 ntBASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 Y_RNA.542-201ENST00000384641 111 ntBASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 MIR520C-201ENST00000385005 87 ntBASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 RNU2-64P-201ENST00000411315 191 ntBASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 RNU6-1270P-201ENST00000517128 108 ntBASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 MIR4255-201ENST00000579351 72 ntBASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 MIR4303-201ENST00000581299 66 ntBASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC144BQ3MJ40 RNA5SP363-201ENST00000365072 115 ntBASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 MIR518F-201ENST00000384973 87 ntBASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 SNORA67.5-201ENST00000391036 107 ntBASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 AC006461.1-201ENST00000412637 326 ntBASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 AP1B1P2-201ENST00000416196 106 ntBASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 RNU6-861P-201ENST00000516745 106 ntBASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 AC098479.1-201ENST00000609225 154 ntBASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC144BQ3MJ40 Y_RNA.226-201ENST00000364337 114 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 SNORD111.1-201ENST00000516421 86 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 RN7SKP88-201ENST00000516847 250 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 MIR3122-201ENST00000577243 73 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 MIR4764-201ENST00000580680 88 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 MIR502-201ENST00000606349 86 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 7SK.8-201ENST00000612110 250 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 7SK.11-201ENST00000615477 250 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 7SK.13-201ENST00000622040 250 ntBASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC144BQ3MJ40 Y_RNA.37-201ENST00000362606 108 ntBASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 RNU6-682P-201ENST00000363843 106 ntBASIC1.96□□□□□ -2.1
CCDC144BQ3MJ40 Y_RNA.337-201ENST00000365312 102 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms