Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 AC007318.2-201ENST00000620999 243 ntBASIC3.88□□□□□ -1.79
NKX1-1Q15270 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX1-1Q15270 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX1-1Q15270 Y_RNA.470-201ENST00000384307 117 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 RNU1-148P-201ENST00000384472 162 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 SNORA26.6-201ENST00000391256 115 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 SNORD123-201ENST00000459473 70 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 AC022137.1-201ENST00000483735 151 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 RN7SL20P-201ENST00000488827 297 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 RNU6-162P-201ENST00000516228 103 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 AC079600.2-201ENST00000550076 130 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 MIR4425-201ENST00000580572 84 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 MIR4777-201ENST00000583710 86 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 MIR4791-201ENST00000607666 84 ntBASIC3.87□□□□□ -1.79
NKX1-1Q15270 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX1-1Q15270 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX1-1Q15270 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX1-1Q15270 AL365361.1-201ENST00000566942 3481 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX1-1Q15270 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
NKX1-1Q15270 MIR597-201ENST00000384968 97 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 MIR660-201ENST00000385235 97 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 RPL39P39-201ENST00000455840 151 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 RNU1-143P-201ENST00000516296 146 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 U1.23-201ENST00000610293 146 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 RNU1-68P-201ENST00000615382 146 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 U1.39-201ENST00000621562 146 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 AC025521.1-201ENST00000621624 286 ntBASIC3.86□□□□□ -1.79
NKX1-1Q15270 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX1-1Q15270 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX1-1Q15270 SNORD116-10-201ENST00000363791 102 ntBASIC3.85□□□□□ -1.79
NKX1-1Q15270 SNORA48.1-201ENST00000390879 135 ntBASIC3.85□□□□□ -1.79
NKX1-1Q15270 RNU7-26P-201ENST00000458980 63 ntBASIC3.85□□□□□ -1.79
NKX1-1Q15270 snoU13.16-201ENST00000459350 104 ntBASIC3.85□□□□□ -1.79
NKX1-1Q15270 AC108729.3-201ENST00000513484 108 ntBASIC3.85□□□□□ -1.79
NKX1-1Q15270 AC103810.6-201ENST00000606708 136 ntBASIC3.85□□□□□ -1.79
NKX1-1Q15270 AC022202.1-201ENST00000613515 211 ntBASIC3.85□□□□□ -1.79
NKX1-1Q15270 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
NKX1-1Q15270 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NKX1-1Q15270 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX1-1Q15270 AL353813.1-201ENST00000440700 253 ntBASIC3.84□□□□□ -1.79
NKX1-1Q15270 SCARNA16.3-201ENST00000516595 184 ntBASIC3.84□□□□□ -1.79
NKX1-1Q15270 AC107016.2-201ENST00000547968 190 ntBASIC3.84□□□□□ -1.79
NKX1-1Q15270 MIR3124-201ENST00000582636 67 ntBASIC3.84□□□□□ -1.79
NKX1-1Q15270 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX1-1Q15270 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NKX1-1Q15270 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.83□□□□□ -1.8
NKX1-1Q15270 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX1-1Q15270 RNU6-675P-201ENST00000384236 104 ntBASIC3.83□□□□□ -1.8
NKX1-1Q15270 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NKX1-1Q15270 snoU13.27-201ENST00000459278 104 ntBASIC3.83□□□□□ -1.8
NKX1-1Q15270 MIR548AR-201ENST00000582191 57 ntBASIC3.83□□□□□ -1.8
NKX1-1Q15270 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX1-1Q15270 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX1-1Q15270 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX1-1Q15270 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NKX1-1Q15270 SNORD115-35-201ENST00000365122 82 ntBASIC3.82□□□□□ -1.8
NKX1-1Q15270 RNU1-51P-201ENST00000365345 176 ntBASIC3.82□□□□□ -1.8
NKX1-1Q15270 RNU6-1276P-201ENST00000365372 104 ntBASIC3.82□□□□□ -1.8
NKX1-1Q15270 RNU6-1124P-201ENST00000384169 107 ntBASIC3.82□□□□□ -1.8
NKX1-1Q15270 RNU2-40P-201ENST00000410833 196 ntBASIC3.82□□□□□ -1.8
NKX1-1Q15270 RPL32P35-201ENST00000415214 394 ntBASIC3.82□□□□□ -1.8
NKX1-1Q15270 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.82□□□□□ -1.8
NKX1-1Q15270 U1.36-201ENST00000620684 176 ntBASIC3.82□□□□□ -1.8
NKX1-1Q15270 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX1-1Q15270 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NKX1-1Q15270 RNU4-82P-201ENST00000362443 140 ntBASIC3.81□□□□□ -1.8
NKX1-1Q15270 RNU6-813P-201ENST00000384691 107 ntBASIC3.81□□□□□ -1.8
NKX1-1Q15270 BTF3P4-201ENST00000418852 495 ntBASIC3.81□□□□□ -1.8
NKX1-1Q15270 HMGN2P3-201ENST00000433603 273 ntBASIC3.81□□□□□ -1.8
NKX1-1Q15270 HMGN2P5-201ENST00000436882 273 ntBASIC3.81□□□□□ -1.8
NKX1-1Q15270 HMGN1P18-201ENST00000457642 277 ntBASIC3.81□□□□□ -1.8
NKX1-1Q15270 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX1-1Q15270 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX1-1Q15270 SNORA32-201ENST00000384072 121 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 MIR518A2-201ENST00000384966 87 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 MIR1283-2-201ENST00000408621 87 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 AC087499.2-201ENST00000432861 149 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 AC093850.1-201ENST00000454121 251 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 RNU7-2P-201ENST00000516096 62 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 AC104027.1-201ENST00000521887 300 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 AC021506.2-201ENST00000612354 169 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 SNORA50A-202ENST00000629536 136 ntBASIC3.8□□□□□ -1.8
NKX1-1Q15270 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NKX1-1Q15270 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX1-1Q15270 SNORA9.2-201ENST00000365361 133 ntBASIC3.79□□□□□ -1.8
NKX1-1Q15270 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NKX1-1Q15270 SUB1P4-201ENST00000566062 339 ntBASIC3.79□□□□□ -1.8
NKX1-1Q15270 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
NKX1-1Q15270 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NKX1-1Q15270 RPL23AP6-201ENST00000446637 472 ntBASIC3.78□□□□□ -1.8
NKX1-1Q15270 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.78□□□□□ -1.8
NKX1-1Q15270 RNU7-43P-201ENST00000516554 64 ntBASIC3.78□□□□□ -1.8
NKX1-1Q15270 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX1-1Q15270 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX1-1Q15270 AC091304.10-201ENST00000641554 121 ntBASIC3.78□□□□□ -1.8
NKX1-1Q15270 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms