Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNU6-62P-201ENST00000516526 102 ntBASIC1.71□□□□□ -2.14
LTBQ06643 RNU6-504P-201ENST00000516568 104 ntBASIC1.71□□□□□ -2.14
LTBQ06643 AP001328.1-201ENST00000528550 176 ntBASIC1.71□□□□□ -2.14
LTBQ06643 MIR548AI-201ENST00000579940 88 ntBASIC1.71□□□□□ -2.14
LTBQ06643 MIR4762-201ENST00000585261 75 ntBASIC1.71□□□□□ -2.14
LTBQ06643 AC069114.2-201ENST00000604699 304 ntBASIC1.71□□□□□ -2.14
LTBQ06643 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
LTBQ06643 ZNF355P-201ENST00000427301 3216 ntBASIC1.71□□□□□ -2.14
LTBQ06643 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LTBQ06643 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LTBQ06643 U8.1-201ENST00000362843 134 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU6-508P-201ENST00000363231 103 ntBASIC1.7□□□□□ -2.14
LTBQ06643 Y_RNA.265-201ENST00000364677 108 ntBASIC1.7□□□□□ -2.14
LTBQ06643 Y_RNA.294-201ENST00000364916 102 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU6-42P-201ENST00000384165 107 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU6-1081P-201ENST00000384537 107 ntBASIC1.7□□□□□ -2.14
LTBQ06643 Y_RNA.540-201ENST00000384638 111 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU6-1154P-201ENST00000391001 104 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU2-51P-201ENST00000410708 197 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU2-40P-201ENST00000410833 196 ntBASIC1.7□□□□□ -2.14
LTBQ06643 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU6-479P-201ENST00000516348 105 ntBASIC1.7□□□□□ -2.14
LTBQ06643 SNORA25.15-201ENST00000516487 89 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU6-1270P-201ENST00000517128 108 ntBASIC1.7□□□□□ -2.14
LTBQ06643 RNU6-1116P-201ENST00000517269 99 ntBASIC1.7□□□□□ -2.14
LTBQ06643 MIR3129-201ENST00000581095 76 ntBASIC1.7□□□□□ -2.14
LTBQ06643 AC087685.1-201ENST00000587507 141 ntBASIC1.7□□□□□ -2.14
LTBQ06643 AC011603.4-201ENST00000611325 277 ntBASIC1.7□□□□□ -2.14
LTBQ06643 TUG1_4.1-201ENST00000619464 181 ntBASIC1.7□□□□□ -2.14
LTBQ06643 U8.5-201ENST00000364528 136 ntBASIC1.69□□□□□ -2.14
LTBQ06643 SNORA4.2-201ENST00000365313 147 ntBASIC1.69□□□□□ -2.14
LTBQ06643 MIR548A2-201ENST00000384956 97 ntBASIC1.69□□□□□ -2.14
LTBQ06643 RNA5SP482-201ENST00000391269 118 ntBASIC1.69□□□□□ -2.14
LTBQ06643 RNA5SP501-201ENST00000410990 112 ntBASIC1.69□□□□□ -2.14
LTBQ06643 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.69□□□□□ -2.14
LTBQ06643 STAG3L5P-204ENST00000443759 179 ntBASIC1.69□□□□□ -2.14
LTBQ06643 RNU6-126P-201ENST00000516685 103 ntBASIC1.69□□□□□ -2.14
LTBQ06643 RNU2-60P-201ENST00000517290 128 ntBASIC1.69□□□□□ -2.14
LTBQ06643 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.69□□□□□ -2.14
LTBQ06643 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LTBQ06643 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LTBQ06643 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LTBQ06643 RNU6-1084P-201ENST00000362498 107 ntBASIC1.68□□□□□ -2.14
LTBQ06643 RNU6-1290P-201ENST00000362957 109 ntBASIC1.68□□□□□ -2.14
LTBQ06643 RNU6-888P-201ENST00000363010 101 ntBASIC1.68□□□□□ -2.14
LTBQ06643 Y_RNA.127-201ENST00000363386 109 ntBASIC1.68□□□□□ -2.14
LTBQ06643 SNORA63D-201ENST00000364359 132 ntBASIC1.68□□□□□ -2.14
LTBQ06643 MIR539-201ENST00000365690 78 ntBASIC1.68□□□□□ -2.14
LTBQ06643 SNORD24-201ENST00000383884 75 ntBASIC1.68□□□□□ -2.14
LTBQ06643 SNORA48.1-201ENST00000390879 135 ntBASIC1.68□□□□□ -2.14
LTBQ06643 AL158823.1-201ENST00000418441 478 ntBASIC1.68□□□□□ -2.14
LTBQ06643 SNRPGP14-201ENST00000435400 219 ntBASIC1.68□□□□□ -2.14
LTBQ06643 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
LTBQ06643 RNU6-693P-201ENST00000516134 107 ntBASIC1.68□□□□□ -2.14
LTBQ06643 SNORD45.4-201ENST00000516629 73 ntBASIC1.68□□□□□ -2.14
LTBQ06643 MIR514B-201ENST00000516774 80 ntBASIC1.68□□□□□ -2.14
LTBQ06643 Y_RNA.714-201ENST00000517065 90 ntBASIC1.68□□□□□ -2.14
LTBQ06643 SUB1P4-201ENST00000566062 339 ntBASIC1.68□□□□□ -2.14
LTBQ06643 AC131055.1-201ENST00000584626 316 ntBASIC1.68□□□□□ -2.14
LTBQ06643 AL365205.2-201ENST00000594586 68 ntBASIC1.68□□□□□ -2.14
LTBQ06643 AL096840.1-201ENST00000603287 93 ntBASIC1.68□□□□□ -2.14
LTBQ06643 U7.2-201ENST00000607576 63 ntBASIC1.68□□□□□ -2.14
LTBQ06643 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.68□□□□□ -2.14
LTBQ06643 ICE2P2-201ENST00000483823 2787 ntBASIC1.68□□□□□ -2.14
LTBQ06643 AL359851.1-201ENST00000569460 4997 ntBASIC1.68□□□□□ -2.14
LTBQ06643 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LTBQ06643 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.67□□□□□ -2.14
LTBQ06643 MIRLET7C-201ENST00000362160 84 ntBASIC1.67□□□□□ -2.14
LTBQ06643 RNA5SP325-201ENST00000363756 130 ntBASIC1.67□□□□□ -2.14
LTBQ06643 RNU6-268P-201ENST00000364174 107 ntBASIC1.67□□□□□ -2.14
LTBQ06643 Y_RNA.525-201ENST00000384570 113 ntBASIC1.67□□□□□ -2.14
LTBQ06643 MIR518F-201ENST00000384973 87 ntBASIC1.67□□□□□ -2.14
LTBQ06643 MIR624-201ENST00000385217 97 ntBASIC1.67□□□□□ -2.14
LTBQ06643 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.67□□□□□ -2.14
LTBQ06643 HMGN2P19-201ENST00000425149 265 ntBASIC1.67□□□□□ -2.14
LTBQ06643 AC008267.6-201ENST00000441664 139 ntBASIC1.67□□□□□ -2.14
LTBQ06643 SNRPGP13-201ENST00000442212 177 ntBASIC1.67□□□□□ -2.14
LTBQ06643 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
LTBQ06643 RNU6-1333P-201ENST00000516162 93 ntBASIC1.67□□□□□ -2.14
LTBQ06643 RNU6-313P-201ENST00000516317 112 ntBASIC1.67□□□□□ -2.14
LTBQ06643 SNORA18.4-201ENST00000516440 124 ntBASIC1.67□□□□□ -2.14
LTBQ06643 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
LTBQ06643 RNA5SP437-201ENST00000517249 129 ntBASIC1.67□□□□□ -2.14
LTBQ06643 AL078603.1-201ENST00000603824 313 ntBASIC1.67□□□□□ -2.14
LTBQ06643 AL627230.6-201ENST00000611129 280 ntBASIC1.67□□□□□ -2.14
LTBQ06643 MIR6504-201ENST00000613520 61 ntBASIC1.67□□□□□ -2.14
LTBQ06643 MTND5P32-201ENST00000560711 1802 ntBASIC1.66□□□□□ -2.14
LTBQ06643 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LTBQ06643 RNU6-235P-201ENST00000362644 107 ntBASIC1.66□□□□□ -2.14
LTBQ06643 Y_RNA.52-201ENST00000362760 96 ntBASIC1.66□□□□□ -2.14
LTBQ06643 Y_RNA.120-201ENST00000363304 110 ntBASIC1.66□□□□□ -2.14
LTBQ06643 SNORD14E-201ENST00000364009 85 ntBASIC1.66□□□□□ -2.14
LTBQ06643 RNU6-309P-201ENST00000364573 106 ntBASIC1.66□□□□□ -2.14
LTBQ06643 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
LTBQ06643 SNORD116-14-201ENST00000383894 92 ntBASIC1.66□□□□□ -2.14
LTBQ06643 SNORD116-17-201ENST00000383929 92 ntBASIC1.66□□□□□ -2.14
LTBQ06643 RNU6-80P-201ENST00000384195 107 ntBASIC1.66□□□□□ -2.14
LTBQ06643 SNORD116-15-201ENST00000384445 92 ntBASIC1.66□□□□□ -2.14
LTBQ06643 RNU6-296P-201ENST00000384608 107 ntBASIC1.66□□□□□ -2.14
LTBQ06643 SNORD116-19-201ENST00000384729 92 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 232.4 ms