Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 HMGN2P35-201ENST00000412164 270 ntBASIC3.41□□□□□ -1.86
BRPF1P55201 RNA5SP57-201ENST00000459463 123 ntBASIC3.41□□□□□ -1.86
BRPF1P55201 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.41□□□□□ -1.86
BRPF1P55201 RNU6-1116P-201ENST00000517269 99 ntBASIC3.41□□□□□ -1.86
BRPF1P55201 MIR5194-201ENST00000582634 120 ntBASIC3.41□□□□□ -1.86
BRPF1P55201 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.41□□□□□ -1.86
BRPF1P55201 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.41□□□□□ -1.86
BRPF1P55201 RNA5SP68-201ENST00000363885 119 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 U8.6-201ENST00000364939 135 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 SNORA2.2-201ENST00000365473 135 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BRPF1P55201 AL627390.1-201ENST00000396055 340 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 MIR1302-5-201ENST00000408164 150 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 AC108210.2-201ENST00000503681 201 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 IGKV3-31-201ENST00000523109 329 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 AC021506.2-201ENST00000612354 169 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 MIR6817-201ENST00000615588 66 ntBASIC3.4□□□□□ -1.87
BRPF1P55201 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
BRPF1P55201 Y_RNA.163-201ENST00000363702 113 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 RNU6-294P-201ENST00000364999 102 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 SNORA1.2-201ENST00000365189 134 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 Y_RNA.454-201ENST00000384224 113 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 MIR660-201ENST00000385235 97 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 RNU7-80P-201ENST00000459562 61 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 AC055731.1-201ENST00000474387 401 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.39□□□□□ -1.87
BRPF1P55201 AP003484.1-201ENST00000530974 250 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 MIR4778-201ENST00000577635 80 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 AP001318.4-201ENST00000616637 121 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 AC009831.4-201ENST00000620744 325 ntBASIC3.39□□□□□ -1.87
BRPF1P55201 RNU6-640P-201ENST00000363693 105 ntBASIC3.38□□□□□ -1.87
BRPF1P55201 Y_RNA.328-201ENST00000365208 113 ntBASIC3.38□□□□□ -1.87
BRPF1P55201 SNORA51.5-201ENST00000384126 131 ntBASIC3.38□□□□□ -1.87
BRPF1P55201 RNA5SP212-201ENST00000391223 107 ntBASIC3.38□□□□□ -1.87
BRPF1P55201 AC107297.1-201ENST00000459991 176 ntBASIC3.38□□□□□ -1.87
BRPF1P55201 COX6CP6-201ENST00000490840 228 ntBASIC3.38□□□□□ -1.87
BRPF1P55201 SNORA18.7-201ENST00000516910 131 ntBASIC3.38□□□□□ -1.87
BRPF1P55201 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.38□□□□□ -1.87
BRPF1P55201 ICE2P2-201ENST00000483823 2787 ntBASIC3.38□□□□□ -1.87
BRPF1P55201 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.37□□□□□ -1.87
BRPF1P55201 Y_RNA.549-201ENST00000384657 102 ntBASIC3.37□□□□□ -1.87
BRPF1P55201 MIR136-201ENST00000385207 82 ntBASIC3.37□□□□□ -1.87
BRPF1P55201 AC011753.1-201ENST00000451001 220 ntBASIC3.37□□□□□ -1.87
BRPF1P55201 RNU6-548P-201ENST00000517083 115 ntBASIC3.37□□□□□ -1.87
BRPF1P55201 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.37□□□□□ -1.87
BRPF1P55201 AL137067.1-201ENST00000615933 120 ntBASIC3.37□□□□□ -1.87
BRPF1P55201 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.37□□□□□ -1.87
BRPF1P55201 SNORD3E-202ENST00000627253 216 ntBASIC3.37□□□□□ -1.87
BRPF1P55201 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BRPF1P55201 MIR424-201ENST00000362227 98 ntBASIC3.36□□□□□ -1.87
BRPF1P55201 SNORA25.6-201ENST00000364121 118 ntBASIC3.36□□□□□ -1.87
BRPF1P55201 MIR764-201ENST00000390811 85 ntBASIC3.36□□□□□ -1.87
BRPF1P55201 AL591806.2-201ENST00000433122 173 ntBASIC3.36□□□□□ -1.87
BRPF1P55201 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.36□□□□□ -1.87
BRPF1P55201 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BRPF1P55201 RNU6-1113P-201ENST00000384348 107 ntBASIC3.35□□□□□ -1.87
BRPF1P55201 SNORA31.17-201ENST00000516953 127 ntBASIC3.35□□□□□ -1.87
BRPF1P55201 MIR4635-201ENST00000583759 79 ntBASIC3.35□□□□□ -1.87
BRPF1P55201 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
BRPF1P55201 ZNF720P1-201ENST00000562403 1939 ntBASIC3.34□□□□□ -1.87
BRPF1P55201 RNU6-1123P-201ENST00000362347 106 ntBASIC3.34□□□□□ -1.87
BRPF1P55201 Y_RNA.366-201ENST00000365540 102 ntBASIC3.34□□□□□ -1.87
BRPF1P55201 RNU6-1014P-201ENST00000383940 103 ntBASIC3.34□□□□□ -1.87
BRPF1P55201 SNORA26.2-201ENST00000390922 122 ntBASIC3.34□□□□□ -1.87
BRPF1P55201 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.34□□□□□ -1.87
BRPF1P55201 RNA5SP148-201ENST00000516527 94 ntBASIC3.34□□□□□ -1.87
BRPF1P55201 SCARNA15-202ENST00000516881 127 ntBASIC3.34□□□□□ -1.87
BRPF1P55201 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.34□□□□□ -1.87
BRPF1P55201 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRPF1P55201 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
BRPF1P55201 Y_RNA.49-201ENST00000362714 112 ntBASIC3.33□□□□□ -1.88
BRPF1P55201 RNU6-1131P-201ENST00000364955 107 ntBASIC3.33□□□□□ -1.88
BRPF1P55201 RNU1-138P-201ENST00000384093 164 ntBASIC3.33□□□□□ -1.88
BRPF1P55201 SNORA40.13-201ENST00000516379 120 ntBASIC3.33□□□□□ -1.88
BRPF1P55201 RNA5SP281-201ENST00000516504 135 ntBASIC3.33□□□□□ -1.88
BRPF1P55201 IGLV3-17-201ENST00000519099 244 ntBASIC3.33□□□□□ -1.88
BRPF1P55201 MIR7111-201ENST00000619751 72 ntBASIC3.33□□□□□ -1.88
BRPF1P55201 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.33□□□□□ -1.88
BRPF1P55201 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BRPF1P55201 AL589743.1-201ENST00000551932 2712 ntBASIC3.33□□□□□ -1.88
BRPF1P55201 RNU1-133P-201ENST00000364867 167 ntBASIC3.32□□□□□ -1.88
BRPF1P55201 Y_RNA.440-201ENST00000384120 114 ntBASIC3.32□□□□□ -1.88
BRPF1P55201 Y_RNA.558-201ENST00000384685 113 ntBASIC3.32□□□□□ -1.88
BRPF1P55201 RNY4P29-201ENST00000410801 97 ntBASIC3.32□□□□□ -1.88
BRPF1P55201 RPL39P34-201ENST00000477141 156 ntBASIC3.32□□□□□ -1.88
BRPF1P55201 SNORD36C-201ENST00000516733 66 ntBASIC3.32□□□□□ -1.88
BRPF1P55201 RNU6-94P-201ENST00000607728 107 ntBASIC3.32□□□□□ -1.88
BRPF1P55201 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-34-201ENST00000362441 82 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-12-201ENST00000362583 82 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-29-201ENST00000362834 82 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-9-201ENST00000362912 82 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-21-201ENST00000362963 81 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-14-201ENST00000363090 81 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-13-201ENST00000363358 82 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORA63.5-201ENST00000363548 123 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-41-201ENST00000363608 82 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-11-201ENST00000363616 82 ntBASIC3.31□□□□□ -1.88
BRPF1P55201 SNORD115-5-201ENST00000363633 82 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms