Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A4P53420 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A4P53420 RNU7-14P-201ENST00000459331 62 ntBASIC1.25□□□□□ -2.21
COL4A4P53420 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A4P53420 RNU5E-3P-201ENST00000515913 68 ntBASIC1.25□□□□□ -2.21
COL4A4P53420 RNU6-948P-201ENST00000516374 107 ntBASIC1.25□□□□□ -2.21
COL4A4P53420 RNU6-365P-201ENST00000517113 106 ntBASIC1.25□□□□□ -2.21
COL4A4P53420 RNU2-60P-201ENST00000517290 128 ntBASIC1.25□□□□□ -2.21
COL4A4P53420 AL109933.3-201ENST00000619095 188 ntBASIC1.25□□□□□ -2.21
COL4A4P53420 RNU6-508P-201ENST00000363231 103 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 RNU6-944P-201ENST00000364023 107 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 RNU6-1240P-201ENST00000365155 104 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 Y_RNA.346-201ENST00000365385 112 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 RNU6-1336P-201ENST00000383886 109 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 RNU6-476P-201ENST00000384726 107 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 AC010531.2-201ENST00000465012 153 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 HMGN2P9-201ENST00000476875 229 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 AC010598.1-201ENST00000510378 103 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 SNORA18.4-201ENST00000516440 124 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 MIR4714-201ENST00000580728 77 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 MIR2681-201ENST00000581814 105 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 RPL30P11-203ENST00000598995 310 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.24□□□□□ -2.21
COL4A4P53420 AC073308.1-201ENST00000623696 305 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 snoZ196.1-201ENST00000625269 89 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 MIR6086-201ENST00000638065 55 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
COL4A4P53420 AL159152.1-201ENST00000635019 2587 ntBASIC1.24□□□□□ -2.21
COL4A4P53420 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.24□□□□□ -2.21
COL4A4P53420 RNU6-655P-201ENST00000362858 107 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 Y_RNA.280-201ENST00000364765 112 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNU6-438P-201ENST00000365561 103 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 Y_RNA.521-201ENST00000384560 114 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNY4P30-201ENST00000410216 95 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AL158823.1-201ENST00000418441 478 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 CYCTP-201ENST00000504253 315 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNU6-113P-201ENST00000516653 101 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 SCARNA3-201ENST00000517097 143 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNA5SP170-201ENST00000517150 101 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AC079598.5-201ENST00000547460 117 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AC091178.2-201ENST00000584401 117 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 Y_RNA.66-201ENST00000362862 102 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 Y_RNA.114-201ENST00000363265 113 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNY1P11-201ENST00000363759 113 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNU6-915P-201ENST00000364943 103 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNU6-418P-201ENST00000384035 107 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 Y_RNA.432-201ENST00000384087 111 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 MIR29B2-201ENST00000385055 81 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
COL4A4P53420 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A4P53420 RPL30P4-201ENST00000429309 333 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AC016717.1-201ENST00000448918 286 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RPS27P1-201ENST00000450552 247 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AC093259.1-201ENST00000509755 300 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 SNORA4.4-201ENST00000515921 135 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNU6-1299P-201ENST00000516316 100 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNU6-63P-201ENST00000516690 95 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 RNU7-149P-201ENST00000516739 59 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 MIR3613-201ENST00000579844 87 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 MIR3117-201ENST00000584034 78 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AL049861.1-201ENST00000603130 150 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AL021707.8-201ENST00000609428 183 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 AC006435.5-201ENST00000624486 112 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 MIR4679-1-201ENST00000637619 75 ntBASIC1.23□□□□□ -2.21
COL4A4P53420 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A4P53420 Y_RNA.85-201ENST00000363014 111 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 RNU6-271P-201ENST00000363858 105 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 SNORA38-201ENST00000363946 132 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 RNU6-647P-201ENST00000364243 107 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 RNU6-147P-201ENST00000383983 107 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 MIR147B-201ENST00000390185 80 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 SNORA26-201ENST00000391286 122 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 RN7SKP200-201ENST00000410564 320 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 MLLT10P1-201ENST00000418346 262 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 EIF4EP4-201ENST00000424916 578 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.22□□□□□ -2.21
COL4A4P53420 RNA5SP153-201ENST00000516498 76 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 Y_RNA.712-201ENST00000517011 92 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 AC025647.1-201ENST00000517879 253 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 RPL23AP91-201ENST00000569211 455 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 MIR4765-201ENST00000585007 77 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 UCA1.1-201ENST00000620952 75 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 MIR3914-2-201ENST00000637339 95 ntBASIC1.22□□□□□ -2.21
COL4A4P53420 MIR373-201ENST00000362273 69 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 Y_RNA.120-201ENST00000363304 110 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 Y_RNA.124-201ENST00000363339 93 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 RNU6-1164P-201ENST00000364428 107 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 SNORD32B-201ENST00000364460 84 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 SNORD31B-201ENST00000364977 69 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 RNU6-117P-201ENST00000365415 107 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 RNU6-1235P-201ENST00000384559 107 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 MIR548A1-201ENST00000385041 97 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 MIR624-201ENST00000385217 97 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 MIR524-201ENST00000385242 87 ntBASIC1.21□□□□□ -2.22
COL4A4P53420 MIR767-201ENST00000390228 109 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms