Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CLCN1P35523 RNU6-820P-201ENST00000384273 107 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 MIR518A2-201ENST00000384966 87 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 MIR605-201ENST00000385078 83 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 MIR577-201ENST00000385196 96 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 RNA5SP261-201ENST00000410536 106 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 SNORA7.5-201ENST00000410672 110 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 AC005326.1-201ENST00000429197 123 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 RPL23AP63-201ENST00000498752 471 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 SCARNA16.3-201ENST00000516595 184 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 RNA5SP33-201ENST00000516687 98 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 RNU6-1258P-201ENST00000516911 111 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 AL590808.1-201ENST00000618696 141 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.38□□□□□ -1.87
CLCN1P35523 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLCN1P35523 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCN1P35523 SNORA48.2-201ENST00000390926 124 ntBASIC3.37□□□□□ -1.87
CLCN1P35523 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.37□□□□□ -1.87
CLCN1P35523 RNU6-795P-201ENST00000516323 103 ntBASIC3.37□□□□□ -1.87
CLCN1P35523 MIR4709-201ENST00000577272 72 ntBASIC3.37□□□□□ -1.87
CLCN1P35523 MIR3124-201ENST00000582636 67 ntBASIC3.37□□□□□ -1.87
CLCN1P35523 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCN1P35523 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.36□□□□□ -1.87
CLCN1P35523 RNU7-61P-201ENST00000515897 61 ntBASIC3.36□□□□□ -1.87
CLCN1P35523 RNA5SP437-201ENST00000517249 129 ntBASIC3.36□□□□□ -1.87
CLCN1P35523 DNAJC19P9-201ENST00000555084 351 ntBASIC3.36□□□□□ -1.87
CLCN1P35523 MIR548AE2-201ENST00000583456 67 ntBASIC3.36□□□□□ -1.87
CLCN1P35523 MIR4791-201ENST00000607666 84 ntBASIC3.36□□□□□ -1.87
CLCN1P35523 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.36□□□□□ -1.87
CLCN1P35523 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CLCN1P35523 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CLCN1P35523 MIR494-201ENST00000349529 81 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 SNORD115-2-201ENST00000362842 82 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 SNORD56.5-201ENST00000364281 72 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 SNORD115-20-201ENST00000365099 82 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 Y_RNA.470-201ENST00000384307 117 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 RNU6-616P-201ENST00000384353 107 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 Y_RNA.500-201ENST00000384466 111 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 MIR128-1-201ENST00000384921 82 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 SNORA48.1-201ENST00000390879 135 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 AC021506.2-201ENST00000612354 169 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 MIR7112-201ENST00000616126 65 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 AC012531.4-201ENST00000616509 177 ntBASIC3.35□□□□□ -1.87
CLCN1P35523 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.35□□□□□ -1.87
CLCN1P35523 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLCN1P35523 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
CLCN1P35523 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLCN1P35523 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCN1P35523 AL161431.1-201ENST00000618966 4205 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCN1P35523 RNU6-170P-201ENST00000362832 104 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 SNORA38.1-201ENST00000364172 131 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 RNA5SP120-201ENST00000410900 112 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 SNORD123-201ENST00000459473 70 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 AP003327.1-201ENST00000529684 127 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 MIR548AR-201ENST00000582191 57 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 AC243994.1-201ENST00000618627 109 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 MIR6841-201ENST00000637129 72 ntBASIC3.34□□□□□ -1.87
CLCN1P35523 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCN1P35523 AC009487.2-201ENST00000420969 6821 ntBASIC3.34□□□□□ -1.88
CLCN1P35523 Y_RNA.290-201ENST00000364879 114 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 SNORA18-201ENST00000384416 132 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 SNORD28B-201ENST00000390993 75 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 RNU6-644P-201ENST00000391155 98 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 RNA5SP492-201ENST00000411330 114 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 AC004941.2-201ENST00000427009 228 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 RN7SL863P-201ENST00000462370 296 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 RPL23AP94-201ENST00000512518 302 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 SUB1P4-201ENST00000566062 339 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 UBL5P2-201ENST00000583788 219 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 AL513423.1-201ENST00000621695 132 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 MIR6717-201ENST00000622747 73 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 SNORD3E-202ENST00000627253 216 ntBASIC3.33□□□□□ -1.88
CLCN1P35523 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCN1P35523 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLCN1P35523 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCN1P35523 RNU6-573P-201ENST00000383938 106 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 SNORA24-201ENST00000384096 131 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 MIR660-201ENST00000385235 97 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 RNU6-679P-201ENST00000391003 106 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 SNORA26.6-201ENST00000391256 115 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 RNU6-1190P-201ENST00000410811 104 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 RNU4-47P-201ENST00000410876 114 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 snoU13.27-201ENST00000459278 104 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 RNU2-13P-201ENST00000515909 113 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 MIR5680-201ENST00000577577 84 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 MIR4658-201ENST00000584344 65 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 MIR6852-201ENST00000621699 66 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 MIR1245B-201ENST00000636115 69 ntBASIC3.32□□□□□ -1.88
CLCN1P35523 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCN1P35523 MIR526A1-201ENST00000384897 85 ntBASIC3.31□□□□□ -1.88
CLCN1P35523 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLCN1P35523 HMGN2P39-201ENST00000398005 273 ntBASIC3.31□□□□□ -1.88
CLCN1P35523 RNA5SP501-201ENST00000410990 112 ntBASIC3.31□□□□□ -1.88
CLCN1P35523 AL353813.1-201ENST00000440700 253 ntBASIC3.31□□□□□ -1.88
CLCN1P35523 RNU6-162P-201ENST00000516228 103 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms