Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RPS27P21-201ENST00000486977 252 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.95□□□□□ -2.1
SLC6A4P31645 RNU6-1270P-201ENST00000517128 108 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 AC134878.1-201ENST00000619901 243 ntBASIC1.95□□□□□ -2.1
SLC6A4P31645 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.95□□□□□ -2.1
SLC6A4P31645 AC010332.2-201ENST00000613083 1904 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SLC6A4P31645 RNU6-1082P-201ENST00000364574 107 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 Y_RNA.584-201ENST00000391090 114 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 RNU7-197P-201ENST00000458836 62 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 AC099513.1-201ENST00000490423 301 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 RNU6-830P-201ENST00000516353 107 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 RNU6-426P-201ENST00000516464 97 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 AC131055.1-201ENST00000584626 316 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 AL442644.1-201ENST00000454390 3105 ntBASIC1.94□□□□□ -2.1
SLC6A4P31645 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SLC6A4P31645 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
SLC6A4P31645 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SLC6A4P31645 RNU6-661P-201ENST00000362409 107 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 MIR518F-201ENST00000384973 87 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 MIR9-3-201ENST00000385084 90 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 SNORA40-201ENST00000388090 126 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 AL356379.1-201ENST00000414105 126 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 CYCSP49-201ENST00000420810 319 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 AC087499.4-201ENST00000448505 178 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 RPS29P11-201ENST00000496507 171 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 RNU6-1116P-201ENST00000517269 99 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
SLC6A4P31645 AP001340.1-201ENST00000624405 217 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 AC091895.1-201ENST00000624494 256 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 SNORD3E-202ENST00000627253 216 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
SLC6A4P31645 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLC6A4P31645 RNU6-414P-201ENST00000363705 104 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 SNORD115-28-201ENST00000363931 81 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 Y_RNA.251-201ENST00000364551 99 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 MIR548A2-201ENST00000384956 97 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.92□□□□□ -2.1
SLC6A4P31645 RPL23AP6-201ENST00000446637 472 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 RNA5SP233-201ENST00000459153 113 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 AC092991.1-201ENST00000477176 376 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 AC022254.1-201ENST00000567857 235 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 MIR3129-201ENST00000581095 76 ntBASIC1.92□□□□□ -2.1
SLC6A4P31645 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.92□□□□□ -2.1
SLC6A4P31645 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
SLC6A4P31645 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SLC6A4P31645 Y_RNA.120-201ENST00000363304 110 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 RNU6-81P-201ENST00000365608 104 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 Y_RNA.420-201ENST00000384043 110 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 SNORA1-201ENST00000384107 130 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 Y_RNA.547-201ENST00000384654 119 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC6A4P31645 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
SLC6A4P31645 AC015922.2-201ENST00000435593 184 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 RNU7-25P-201ENST00000516544 62 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 MIR4713-201ENST00000582691 75 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 TUG1_4.1-201ENST00000619464 181 ntBASIC1.91□□□□□ -2.1
SLC6A4P31645 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SLC6A4P31645 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 MIR337-201ENST00000362281 93 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 SNORD18B-201ENST00000365659 72 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 MIR136-201ENST00000385207 82 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 MIR1287-201ENST00000408492 90 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 MTATP6P21-201ENST00000440681 189 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 AP001328.1-201ENST00000528550 176 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 snoU13.31-201ENST00000607291 104 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 AC015726.2-201ENST00000620112 122 ntBASIC1.9□□□□□ -2.11
SLC6A4P31645 MIR539-201ENST00000365690 78 ntBASIC1.89□□□□□ -2.11
SLC6A4P31645 RNU6-1189P-201ENST00000383958 107 ntBASIC1.89□□□□□ -2.11
SLC6A4P31645 Y_RNA.586-201ENST00000391146 98 ntBASIC1.89□□□□□ -2.11
SLC6A4P31645 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
SLC6A4P31645 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC6A4P31645 MIR514B-201ENST00000516774 80 ntBASIC1.89□□□□□ -2.11
SLC6A4P31645 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
SLC6A4P31645 MIR4781-201ENST00000585250 76 ntBASIC1.89□□□□□ -2.11
SLC6A4P31645 Y_RNA.37-201ENST00000362606 108 ntBASIC1.88□□□□□ -2.11
SLC6A4P31645 SNORD113-1-201ENST00000365321 69 ntBASIC1.88□□□□□ -2.11
SLC6A4P31645 SNORD77.3-201ENST00000391113 65 ntBASIC1.88□□□□□ -2.11
SLC6A4P31645 RNU6-257P-201ENST00000410238 98 ntBASIC1.88□□□□□ -2.11
SLC6A4P31645 AC108667.1-201ENST00000428618 249 ntBASIC1.88□□□□□ -2.11
SLC6A4P31645 MIR5197-201ENST00000583721 112 ntBASIC1.88□□□□□ -2.11
SLC6A4P31645 U7.2-201ENST00000607576 63 ntBASIC1.88□□□□□ -2.11
SLC6A4P31645 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SLC6A4P31645 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SLC6A4P31645 SNORA1.2-201ENST00000365189 134 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 RNU6-1336P-201ENST00000383886 109 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 MIR194-1-201ENST00000384892 85 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SLC6A4P31645 RNU6-460P-201ENST00000391158 108 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 AC004965.1-201ENST00000413033 213 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 AF228730.3-201ENST00000436691 102 ntBASIC1.87□□□□□ -2.11
SLC6A4P31645 Y_RNA.757-201ENST00000578934 114 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms