Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.67□□□□□ -1.66
NPM3O75607 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.67□□□□□ -1.66
NPM3O75607 SNORA73.2-201ENST00000364946 201 ntBASIC4.67□□□□□ -1.66
NPM3O75607 MIR653-201ENST00000385279 96 ntBASIC4.67□□□□□ -1.66
NPM3O75607 MIR199A2-201ENST00000385289 110 ntBASIC4.67□□□□□ -1.66
NPM3O75607 AC092427.1-202ENST00000430569 476 ntBASIC4.67□□□□□ -1.66
NPM3O75607 MIR4264-201ENST00000583520 66 ntBASIC4.67□□□□□ -1.66
NPM3O75607 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPM3O75607 NEAT1-202ENST00000501122 22743 ntBASIC4.67□□□□□ -1.66
NPM3O75607 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPM3O75607 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPM3O75607 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPM3O75607 MIR30D-201ENST00000362283 70 ntBASIC4.66□□□□□ -1.66
NPM3O75607 MT-TF-201ENST00000387314 71 ntBASIC4.66□□□□□ -1.66
NPM3O75607 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPM3O75607 RNA5SP501-201ENST00000410990 112 ntBASIC4.66□□□□□ -1.66
NPM3O75607 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.66□□□□□ -1.66
NPM3O75607 RPS26P28-201ENST00000470806 348 ntBASIC4.66□□□□□ -1.66
NPM3O75607 SNORA31.15-201ENST00000516771 132 ntBASIC4.66□□□□□ -1.66
NPM3O75607 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC4.66□□□□□ -1.66
NPM3O75607 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
NPM3O75607 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NPM3O75607 RNA5SP119-201ENST00000362715 117 ntBASIC4.65□□□□□ -1.67
NPM3O75607 RNU1-51P-201ENST00000365345 176 ntBASIC4.65□□□□□ -1.67
NPM3O75607 RNU6-1165P-201ENST00000410119 107 ntBASIC4.65□□□□□ -1.67
NPM3O75607 HMGN2P35-201ENST00000412164 270 ntBASIC4.65□□□□□ -1.67
NPM3O75607 RPS27P16-201ENST00000425758 201 ntBASIC4.65□□□□□ -1.67
NPM3O75607 AC026403.1-201ENST00000518938 295 ntBASIC4.65□□□□□ -1.67
NPM3O75607 IGLV3-26-201ENST00000520756 302 ntBASIC4.65□□□□□ -1.67
NPM3O75607 CYP4A43P-201ENST00000568156 121 ntBASIC4.65□□□□□ -1.67
NPM3O75607 U1.36-201ENST00000620684 176 ntBASIC4.65□□□□□ -1.67
NPM3O75607 AC103706.3-201ENST00000636297 85 ntBASIC4.65□□□□□ -1.67
NPM3O75607 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NPM3O75607 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
NPM3O75607 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPM3O75607 RNU1-95P-201ENST00000516357 160 ntBASIC4.64□□□□□ -1.67
NPM3O75607 SNORD111.1-201ENST00000516421 86 ntBASIC4.64□□□□□ -1.67
NPM3O75607 RNA5SP164-201ENST00000516533 110 ntBASIC4.64□□□□□ -1.67
NPM3O75607 RNU1-128P-201ENST00000516704 160 ntBASIC4.64□□□□□ -1.67
NPM3O75607 DEFB122-202ENST00000569013 197 ntBASIC4.64□□□□□ -1.67
NPM3O75607 MIR5187-201ENST00000583479 76 ntBASIC4.64□□□□□ -1.67
NPM3O75607 MIR6740-201ENST00000618268 113 ntBASIC4.64□□□□□ -1.67
NPM3O75607 VPS35-212ENST00000640313 141 ntTSL 5 BASIC4.64□□□□□ -1.67
NPM3O75607 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NPM3O75607 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPM3O75607 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPM3O75607 RNU6-360P-201ENST00000390944 104 ntBASIC4.63□□□□□ -1.67
NPM3O75607 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.63□□□□□ -1.67
NPM3O75607 ARF4P2-201ENST00000430209 526 ntBASIC4.63□□□□□ -1.67
NPM3O75607 LINC01355-201ENST00000566551 5444 ntBASIC4.63□□□□□ -1.67
NPM3O75607 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPM3O75607 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPM3O75607 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NPM3O75607 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NPM3O75607 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.62□□□□□ -1.67
NPM3O75607 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPM3O75607 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPM3O75607 NDUFB9P3-201ENST00000521269 501 ntBASIC4.62□□□□□ -1.67
NPM3O75607 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NPM3O75607 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPM3O75607 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPM3O75607 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPM3O75607 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPM3O75607 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPM3O75607 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPM3O75607 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.61□□□□□ -1.67
NPM3O75607 SNORA5A-201ENST00000384111 134 ntBASIC4.61□□□□□ -1.67
NPM3O75607 Y_RNA.606-201ENST00000410579 103 ntBASIC4.61□□□□□ -1.67
NPM3O75607 RN7SKP220-201ENST00000410611 288 ntBASIC4.61□□□□□ -1.67
NPM3O75607 AC092628.1-201ENST00000436250 252 ntBASIC4.61□□□□□ -1.67
NPM3O75607 HLA-N-201ENST00000437516 135 ntBASIC4.61□□□□□ -1.67
NPM3O75607 RNU6-531P-201ENST00000516694 104 ntBASIC4.61□□□□□ -1.67
NPM3O75607 RNU7-10P-201ENST00000607194 63 ntBASIC4.61□□□□□ -1.67
NPM3O75607 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NPM3O75607 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPM3O75607 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPM3O75607 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPM3O75607 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPM3O75607 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NPM3O75607 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
NPM3O75607 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC4.6□□□□□ -1.67
NPM3O75607 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NPM3O75607 RNU6-881P-201ENST00000516813 102 ntBASIC4.6□□□□□ -1.67
NPM3O75607 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NPM3O75607 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.59□□□□□ -1.67
NPM3O75607 RNU6-614P-201ENST00000384369 107 ntBASIC4.59□□□□□ -1.67
NPM3O75607 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.59□□□□□ -1.67
NPM3O75607 U6.59-201ENST00000615686 107 ntBASIC4.59□□□□□ -1.67
NPM3O75607 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.59□□□□□ -1.67
NPM3O75607 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NPM3O75607 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NPM3O75607 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
NPM3O75607 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.59□□□□□ -1.68
NPM3O75607 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NPM3O75607 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPM3O75607 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
NPM3O75607 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPM3O75607 MIR4511-201ENST00000582784 87 ntBASIC4.58□□□□□ -1.68
NPM3O75607 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPM3O75607 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms