Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL356280.1-201ENST00000603614 379 ntBASIC3.35□□□□□ -1.87
GFRA3O60609 AC069114.2-201ENST00000604699 304 ntBASIC3.35□□□□□ -1.87
GFRA3O60609 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.35□□□□□ -1.87
GFRA3O60609 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
GFRA3O60609 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.35□□□□□ -1.87
GFRA3O60609 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA3O60609 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.34□□□□□ -1.87
GFRA3O60609 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GFRA3O60609 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
GFRA3O60609 MIRLET7F1-201ENST00000362202 87 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 SNORD36A-201ENST00000362874 73 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 RNU6-546P-201ENST00000383991 107 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 MIR607-201ENST00000385241 96 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 MIR708-201ENST00000390708 88 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 MIR548U-201ENST00000390728 81 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 RNA5SP184-201ENST00000411071 108 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 RN7SL297P-201ENST00000483161 293 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 MIR4319-201ENST00000577285 85 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 MIR466-201ENST00000580653 84 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 AC243994.1-201ENST00000618627 109 ntBASIC3.34□□□□□ -1.87
GFRA3O60609 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
GFRA3O60609 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
GFRA3O60609 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
GFRA3O60609 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
GFRA3O60609 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
GFRA3O60609 Y_RNA.283-201ENST00000364798 112 ntBASIC3.33□□□□□ -1.88
GFRA3O60609 RNY1P13-201ENST00000365030 105 ntBASIC3.33□□□□□ -1.88
GFRA3O60609 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GFRA3O60609 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.33□□□□□ -1.88
GFRA3O60609 RNU1-41P-201ENST00000516161 162 ntBASIC3.33□□□□□ -1.88
GFRA3O60609 RNU1-48P-201ENST00000516400 162 ntBASIC3.33□□□□□ -1.88
GFRA3O60609 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.33□□□□□ -1.88
GFRA3O60609 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.33□□□□□ -1.88
GFRA3O60609 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
GFRA3O60609 OTUD4P1-201ENST00000237841 3067 ntBASIC3.33□□□□□ -1.88
GFRA3O60609 AL355596.1-201ENST00000565399 3996 ntBASIC3.32□□□□□ -1.88
GFRA3O60609 RNY1P2-201ENST00000364820 117 ntBASIC3.32□□□□□ -1.88
GFRA3O60609 MIR518E-201ENST00000385252 88 ntBASIC3.32□□□□□ -1.88
GFRA3O60609 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.32□□□□□ -1.88
GFRA3O60609 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.32□□□□□ -1.88
GFRA3O60609 RPL23AP6-201ENST00000446637 472 ntBASIC3.32□□□□□ -1.88
GFRA3O60609 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
GFRA3O60609 RNA5SP112-201ENST00000515937 99 ntBASIC3.32□□□□□ -1.88
GFRA3O60609 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.32□□□□□ -1.88
GFRA3O60609 SNORD92-201ENST00000585078 85 ntBASIC3.32□□□□□ -1.88
GFRA3O60609 AL357312.1-201ENST00000603879 298 ntBASIC3.32□□□□□ -1.88
GFRA3O60609 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GFRA3O60609 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
GFRA3O60609 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GFRA3O60609 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
GFRA3O60609 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
GFRA3O60609 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.31□□□□□ -1.88
GFRA3O60609 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GFRA3O60609 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
GFRA3O60609 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
GFRA3O60609 AC245047.3-201ENST00000429428 127 ntBASIC3.31□□□□□ -1.88
GFRA3O60609 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.31□□□□□ -1.88
GFRA3O60609 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.31□□□□□ -1.88
GFRA3O60609 AC008885.1-201ENST00000514930 301 ntBASIC3.31□□□□□ -1.88
GFRA3O60609 MIR3690-201ENST00000580266 75 ntBASIC3.31□□□□□ -1.88
GFRA3O60609 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GFRA3O60609 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
GFRA3O60609 AL161722.3-201ENST00000605789 2983 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA3O60609 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.3□□□□□ -1.88
GFRA3O60609 RNA5SP322-201ENST00000363617 119 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 MIR515-2-201ENST00000384883 83 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 MIR515-1-201ENST00000384884 83 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 SNORD28B-201ENST00000390993 75 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 Y_RNA.606-201ENST00000410579 103 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 HMGN2P7-201ENST00000456186 273 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 MIR548AR-201ENST00000582191 57 ntBASIC3.3□□□□□ -1.88
GFRA3O60609 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.3□□□□□ -1.88
GFRA3O60609 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.3□□□□□ -1.88
GFRA3O60609 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA3O60609 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA3O60609 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA3O60609 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GFRA3O60609 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.29□□□□□ -1.88
GFRA3O60609 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GFRA3O60609 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
GFRA3O60609 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.29□□□□□ -1.88
GFRA3O60609 Y_RNA.207-201ENST00000364142 106 ntBASIC3.29□□□□□ -1.88
GFRA3O60609 NDUFB9P3-201ENST00000521269 501 ntBASIC3.29□□□□□ -1.88
GFRA3O60609 AP000867.2-201ENST00000532468 320 ntBASIC3.29□□□□□ -1.88
GFRA3O60609 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.29□□□□□ -1.88
GFRA3O60609 RNVU1-4-201ENST00000612985 164 ntBASIC3.29□□□□□ -1.88
GFRA3O60609 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.29□□□□□ -1.88
GFRA3O60609 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GFRA3O60609 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
GFRA3O60609 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
GFRA3O60609 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GFRA3O60609 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.28□□□□□ -1.88
GFRA3O60609 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GFRA3O60609 LINC02471-203ENST00000641941 4752 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GFRA3O60609 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GFRA3O60609 RNU6-833P-201ENST00000363486 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms