Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 MIR1273D-201ENST00000577266 86 ntBASIC2.56□□□□□ -2
SMARCA5O60264 MIR3198-2-201ENST00000577868 80 ntBASIC2.56□□□□□ -2
SMARCA5O60264 AC103810.8-201ENST00000607347 118 ntBASIC2.56□□□□□ -2
SMARCA5O60264 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCA5O60264 MIR518F-201ENST00000384973 87 ntBASIC2.55□□□□□ -2
SMARCA5O60264 MIR676-201ENST00000390702 67 ntBASIC2.55□□□□□ -2
SMARCA5O60264 SNORA48.3-201ENST00000391081 134 ntBASIC2.55□□□□□ -2
SMARCA5O60264 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SMARCA5O60264 snoU13.27-201ENST00000459278 104 ntBASIC2.55□□□□□ -2
SMARCA5O60264 RNU6-168P-201ENST00000516189 101 ntBASIC2.55□□□□□ -2
SMARCA5O60264 RNU6-341P-201ENST00000516973 96 ntBASIC2.55□□□□□ -2
SMARCA5O60264 MIR4435-1-201ENST00000582552 80 ntBASIC2.55□□□□□ -2
SMARCA5O60264 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.54□□□□□ -2
SMARCA5O60264 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMARCA5O60264 AL359851.1-201ENST00000569460 4997 ntBASIC2.54□□□□□ -2
SMARCA5O60264 MIR450A1-201ENST00000362262 91 ntBASIC2.54□□□□□ -2
SMARCA5O60264 MIR126-201ENST00000362291 85 ntBASIC2.54□□□□□ -2
SMARCA5O60264 SNORA1B-201ENST00000362535 133 ntBASIC2.54□□□□□ -2
SMARCA5O60264 AL356320.1-201ENST00000429616 163 ntBASIC2.54□□□□□ -2
SMARCA5O60264 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMARCA5O60264 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.54□□□□□ -2
SMARCA5O60264 RNU6-693P-201ENST00000516134 107 ntBASIC2.54□□□□□ -2
SMARCA5O60264 RNU6-126P-201ENST00000516685 103 ntBASIC2.54□□□□□ -2
SMARCA5O60264 RNU6-1149P-201ENST00000516810 97 ntBASIC2.54□□□□□ -2
SMARCA5O60264 MIR8074-201ENST00000615081 81 ntBASIC2.54□□□□□ -2
SMARCA5O60264 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SMARCA5O60264 Y_RNA.346-201ENST00000365385 112 ntBASIC2.53□□□□□ -2
SMARCA5O60264 RNU6-1292P-201ENST00000383856 107 ntBASIC2.53□□□□□ -2
SMARCA5O60264 SNORD24-201ENST00000383884 75 ntBASIC2.53□□□□□ -2
SMARCA5O60264 MIR522-201ENST00000385071 87 ntBASIC2.53□□□□□ -2
SMARCA5O60264 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
SMARCA5O60264 RN7SKP200-201ENST00000410564 320 ntBASIC2.53□□□□□ -2
SMARCA5O60264 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.53□□□□□ -2
SMARCA5O60264 RNU6-717P-201ENST00000459076 104 ntBASIC2.53□□□□□ -2
SMARCA5O60264 TRBV12-1-201ENST00000479785 344 ntBASIC2.53□□□□□ -2
SMARCA5O60264 MIR4709-201ENST00000577272 72 ntBASIC2.53□□□□□ -2
SMARCA5O60264 uc_338.28-201ENST00000612082 187 ntBASIC2.53□□□□□ -2
SMARCA5O60264 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SMARCA5O60264 RNU6-880P-201ENST00000384526 107 ntBASIC2.52□□□□□ -2.01
SMARCA5O60264 Y_RNA.528-201ENST00000384575 108 ntBASIC2.52□□□□□ -2.01
SMARCA5O60264 MIR30A-201ENST00000385092 71 ntBASIC2.52□□□□□ -2.01
SMARCA5O60264 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.52□□□□□ -2.01
SMARCA5O60264 RNA5SP489-201ENST00000410986 109 ntBASIC2.52□□□□□ -2.01
SMARCA5O60264 AC245047.3-201ENST00000429428 127 ntBASIC2.52□□□□□ -2.01
SMARCA5O60264 MIR5089-201ENST00000580047 84 ntBASIC2.52□□□□□ -2.01
SMARCA5O60264 Y_RNA.116-201ENST00000363292 103 ntBASIC2.51□□□□□ -2.01
SMARCA5O60264 Y_RNA.366-201ENST00000365540 102 ntBASIC2.51□□□□□ -2.01
SMARCA5O60264 AL606517.2-201ENST00000442855 241 ntBASIC2.51□□□□□ -2.01
SMARCA5O60264 RNU1-41P-201ENST00000516161 162 ntBASIC2.51□□□□□ -2.01
SMARCA5O60264 RNU1-48P-201ENST00000516400 162 ntBASIC2.51□□□□□ -2.01
SMARCA5O60264 AC022217.4-201ENST00000604389 163 ntBASIC2.51□□□□□ -2.01
SMARCA5O60264 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.51□□□□□ -2.01
SMARCA5O60264 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCA5O60264 RNU6-106P-201ENST00000384405 107 ntBASIC2.5□□□□□ -2.01
SMARCA5O60264 Y_RNA.549-201ENST00000384657 102 ntBASIC2.5□□□□□ -2.01
SMARCA5O60264 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SMARCA5O60264 RNA5SP109-201ENST00000391010 116 ntBASIC2.5□□□□□ -2.01
SMARCA5O60264 MTATP6P21-201ENST00000440681 189 ntBASIC2.5□□□□□ -2.01
SMARCA5O60264 JTBP1-201ENST00000441314 247 ntBASIC2.5□□□□□ -2.01
SMARCA5O60264 SNRPGP13-201ENST00000442212 177 ntBASIC2.5□□□□□ -2.01
SMARCA5O60264 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMARCA5O60264 AL445646.1-201ENST00000431784 216 ntBASIC2.49□□□□□ -2.01
SMARCA5O60264 AL049830.1-201ENST00000468034 425 ntBASIC2.49□□□□□ -2.01
SMARCA5O60264 AL358944.1-201ENST00000528537 144 ntBASIC2.49□□□□□ -2.01
SMARCA5O60264 SNORA28-201ENST00000606769 126 ntBASIC2.49□□□□□ -2.01
SMARCA5O60264 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.49□□□□□ -2.01
SMARCA5O60264 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SMARCA5O60264 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMARCA5O60264 Y_RNA.309-201ENST00000365046 111 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 Y_RNA.495-201ENST00000384435 112 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 MIR1267-201ENST00000408723 78 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 SNRPGP14-201ENST00000435400 219 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 AC025033.1-201ENST00000463883 194 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 AC008834.1-201ENST00000511612 175 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 RNU7-28P-201ENST00000516759 62 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 MIR5197-201ENST00000583721 112 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 AC002984.1-201ENST00000591692 448 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 MIR8054-201ENST00000620877 86 ntBASIC2.48□□□□□ -2.01
SMARCA5O60264 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SMARCA5O60264 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.48□□□□□ -2.01
SMARCA5O60264 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SMARCA5O60264 U8.2-201ENST00000363156 134 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 SNORD68-201ENST00000363214 84 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 RNA5SP138-201ENST00000365098 114 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 MIR548O-201ENST00000408583 114 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 RNU6-554P-201ENST00000410466 106 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 AC079804.2-201ENST00000490376 200 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 RNU6-240P-201ENST00000516098 97 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 RNU7-25P-201ENST00000516544 62 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 AP002004.2-201ENST00000531656 154 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 AL137067.1-201ENST00000615933 120 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 ICE2P2-201ENST00000483823 2787 ntBASIC2.47□□□□□ -2.01
SMARCA5O60264 Y_RNA.281-201ENST00000364774 94 ntBASIC2.46□□□□□ -2.02
SMARCA5O60264 AL034345.1-201ENST00000407768 123 ntBASIC2.46□□□□□ -2.02
SMARCA5O60264 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCA5O60264 RNU7-34P-201ENST00000459394 64 ntBASIC2.46□□□□□ -2.02
SMARCA5O60264 AC090255.1-201ENST00000495779 349 ntBASIC2.46□□□□□ -2.02
SMARCA5O60264 AC007012.1-201ENST00000567192 175 ntBASIC2.46□□□□□ -2.02
SMARCA5O60264 AL035470.1-201ENST00000622571 220 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms